RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 H0YIV9 168 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 PSMD12O00232 456 aaPredicted RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 VILLO15195 856 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 GYG2O15488 501 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 SEC22BO75396 215 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 KRT34O76011 436 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 RSL1D1O76021 490 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 CSF2P04141 144 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ANXA6P08133 673 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 CDH1P12830 882 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 NPPBP16860 134 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 CMPK1P30085 196 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 PKLRP30613 574 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 GRK3P35626 688 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 HTR6P50406 440 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 NXPH1P58417 271 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ERVK-8P63133 956 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ABATP80404 500 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 DMWDQ09019 674 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ART3Q13508 389 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 C1orf61Q13536 156 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 DDX39BQ13838 428 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 GRB7Q14451 532 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 NAA25Q14CX7 972 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 HERC3Q15034 1050 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 RBBP5Q15291 538 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 MMEL1Q495T6 779 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 DNAL1Q4LDG9 190 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 AGKQ53H12 422 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 XKR7Q5GH72 579 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 OGFOD2Q6N063 350 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 IYDQ6PHW0 289 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 LAYNQ6UX15 382 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 SLCO4C1Q6ZQN7 724 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 CHSY3Q70JA7 882 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 FAM9CQ8IZT9 166 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ARHGAP24Q8N264 748 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 OR4E2Q8NGC2 313 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 RP9Q8TA86 221 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 ZDHHC1Q8WTX9 485 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ZFPM2Q8WW38 1151 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 DNASE2BQ8WZ79 361 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 USP7Q93009 1102 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 NEIL2Q969S2 332 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 MCUR1Q96AQ8 359 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 PRR11Q96HE9 360 aaPredicted RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 OR4K3Q96R72 315 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 HBEGFQ99075 208 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 TCEAL2Q9H3H9 227 aaPredicted RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 EHD1Q9H4M9 534 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 PELI2Q9HAT8 420 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 MRPS30Q9NP92 439 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 GPR27Q9NS67 375 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 C1orf109Q9NX04 203 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 OR6C2Q9NZP2 312 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 SCHIP1Q9P0W5 487 aaPredicted RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 SUSD2Q9UGT4 822 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 ADGRE2Q9UHX3 823 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 RRP15Q9Y3B9 282 aaKnown RBP9.36□□□□□ -0.91
RFC4-210ENST00000449502 F5P12259 2224 aa9.36□□□□□ -0.91
RFC4-210ENST00000449502 A0A1B0GTW7 788 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 B2RBV5 119 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 B4DGG1 531 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 DNAJC8O75937 253 aaPredicted RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 WFS1O76024 890 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 PDYNP01213 254 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 WNT1P04628 370 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 ERGP11308 486 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 COX4I1P13073 169 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 HSD3B1P14060 373 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 PCSK2P16519 638 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 HRH2P25021 359 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 HSD3B2P26439 372 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 PTPN4P29074 926 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 SERPINB1P30740 379 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CASP2P42575 452 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CPA2P48052 419 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CSNK1EP49674 416 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 NEK2P51955 445 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 NME5P56597 212 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 KCNK10P57789 538 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 RPL38P63173 70 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 HMGCS1Q01581 520 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 EMX2Q04743 252 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 PCDH1Q08174 1060 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CSTF3Q12996 717 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 STX5Q13190 355 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CUL3Q13618 768 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 SF1Q15637 639 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 ZXDCQ2QGD7 858 aaPredicted RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 SMU1Q2TAY7 513 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 C6orf136Q5SQH8 315 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CATSPEREQ5SY80 951 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 SNX32Q86XE0 403 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms