RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GNAZP19086 355 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 POLR2CP19387 275 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 CCNG1P51959 295 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PRDX1Q06830 199 aaKnown RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 AASDHQ4L235 1098 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PRAMEF9Q5VWM5 478 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ICE2Q659A1 982 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 GUSBP11Q6P575 273 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 SYVN1Q86TM6 617 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 SLC5A11Q8WWX8 675 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 NAT6Q93015 286 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 WDR34Q96EX3 536 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 OR2A14Q96R47 310 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ACAT2Q9BWD1 397 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 MID1IP1Q9NPA3 183 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 KCNK4Q9NYG8 393 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 IGHV1OR21-1A0A087WYE8 117 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ISM1B1AKI9 464 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 MATN2O00339 956 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 UGDHO60701 494 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 EDF1O60869 148 aaKnown RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ESRRBO95718 433 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 EBLN1P0CF75 366 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 UGT2B7P16662 529 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 TYRP1P17643 537 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 AMD1P17707 334 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PRDX3P30048 256 aaKnown RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 CASP2P42575 452 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ERVPABLB-1P60509 514 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 GPLD1P80108 840 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ABATP80404 500 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 PRKAA1Q13131 559 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 SLCO4C1Q6ZQN7 724 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 C17orf64Q86WR6 236 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 C10orf67Q8IYJ2 551 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 L3MBTL4Q8NA19 623 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 OR2L3Q8NG85 312 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 ATP6V1E2Q96A05 226 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 GRAMD1AQ96CP6 724 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 RAB33BQ9H082 229 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 EHD1Q9H4M9 534 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 TNFRSF12AQ9NP84 129 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 EVA1BQ9NVM1 165 aa13.55□□□□□ -0.24
SHMT2-203ENST00000449049 RRP15Q9Y3B9 282 aaKnown RBP13.55□□□□□ -0.24
SHMT2-203ENST00000449049 VPS13AQ96RL7 3174 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 GSAPA4D1B5 854 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 B4GAT1O43505 415 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 WFS1O76024 890 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 FKBP9O95302 570 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 MPSTP25325 297 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 OR1D5P58170 312 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 YBX1P67809 324 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 TBCCQ15814 346 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 GGTA1PQ4G0N0 100 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ATG9BQ674R7 924 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 LETMD1Q6P1Q0 360 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 FAM47EQ6ZV65 393 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 OR4F6Q8NGB9 312 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 BAHD1Q8TBE0 780 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CNDP2Q96KP4 475 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 SHCBP1LQ9BZQ2 653 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ILKAPQ9H0C8 392 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 TRPS1Q9UHF7 1281 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 DNAH14Q0VDD8 3507 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 MYO15AQ9UKN7 3530 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 GIPC1O14908 333 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CLDN9O95484 217 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 LDOC1O95751 146 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 FGF4P08620 206 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CDH1P12830 882 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ALDH4A1P30038 563 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CMPK1P30085 196 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 DAB2P98082 770 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 NHLH1Q02575 133 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 CHIT1Q13231 466 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 LIPJQ5W064 366 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ARMC6Q6NXE6 501 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 SPESP1Q6UW49 350 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 NXPE4Q6UWF7 544 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 EFL1Q7Z2Z2 1120 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 MILR1Q7Z6M3 343 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 TMPRSS11BQ86T26 416 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 NAXDQ8IW45 347 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 LRRC34Q8IZ02 419 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 DCBLD1Q8N8Z6 715 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms