RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PSMF1Q92530 271 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 ANAPC5Q9UJX4 755 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 TTC7AQ9ULT0 858 aaPredicted RBP23.24■■□□□ 1.31
PMS1-214ENST00000446877 MRFAP1Q9Y605 127 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 PRICKLE3O43900 615 aaPredicted RBP23.23■■□□□ 1.31
PMS1-214ENST00000446877 COX6A1P12074 109 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 AOAHP28039 575 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 PRAMEP78395 509 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 RBPJQ06330 500 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 TBX2Q13207 712 aaPredicted RBP23.23■■□□□ 1.31
PMS1-214ENST00000446877 AARS2Q5JTZ9 985 aaKnown RBP23.23■■□□□ 1.31
PMS1-214ENST00000446877 TSTD2Q5T7W7 516 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 RPTNQ6XPR3 784 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 BNC2Q6ZN30 1099 aaPredicted RBP23.23■■□□□ 1.31
PMS1-214ENST00000446877 DNAJB8Q8NHS0 232 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 ALG3Q92685 438 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 CCDC120Q96HB5 630 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 SEC14L3Q9UDX4 400 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 SLC2A6Q9UGQ3 507 aa23.23■■□□□ 1.31
PMS1-214ENST00000446877 C2CD3Q4AC94 2353 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 LOC105369274A0A096LPK9 316 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 LOC102723532A0A0G2JNH3 316 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 PRPF4O43172 522 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■■□□ 15.6
PMS1-214ENST00000446877 RASAL1O95294 804 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 MED26O95402 600 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 ADRA1DP25100 572 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 AP2B1P63010 937 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 EEF1A2Q05639 463 aaKnown RBP23.22■■□□□ 1.31
PMS1-214ENST00000446877 ZNF630Q2M218 657 aaPredicted RBP23.22■■□□□ 1.31
PMS1-214ENST00000446877 PTRHD1Q6GMV3 140 aaKnown RBP23.22■■□□□ 1.31
PMS1-214ENST00000446877 PPP1R21Q6ZMI0 780 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 LAPTM4BQ86VI4 370 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 OR4N4Q8N0Y3 316 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 KRT222Q8N1A0 295 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 OR2L3Q8NG85 312 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 LKAAEAR1Q8TD35 194 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 CABS1Q96KC9 395 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 RIC8BQ9NVN3 520 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 ABI3Q9P2A4 366 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 STOX2Q9P2F5 926 aaPredicted RBP23.22■■□□□ 1.31
PMS1-214ENST00000446877 TRPC4Q9UBN4 977 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 RIMKLBQ9ULI2 386 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 KLK4Q9Y5K2 254 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 ADGRG4Q8IZF6 3080 aa23.22■■□□□ 1.31
PMS1-214ENST00000446877 PDZD2O15018 2839 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 IGLV3-12A0A075B6K2 115 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 ERI2A8K979 691 aaKnown RBP23.21■■□□□ 1.31
PMS1-214ENST00000446877 IDSB3KWA1 339 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 F10P00742 488 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 HEXBP07686 556 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 SNRPB2P08579 225 aaKnown RBP23.21■■□□□ 1.31
PMS1-214ENST00000446877 PSMB5P28074 263 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 GDF10P55107 478 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 CASP6P55212 293 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 NAA25Q14CX7 972 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 RIPOR1Q6ZS17 1223 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 ZNF534Q76KX8 674 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 LURAP1Q96LR2 239 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 FOPNLQ96NB1 174 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 TMEM121Q9BTD3 319 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 NUP210LQ5VU65 1888 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 MYO7BQ6PIF6 2116 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 TACC2O95359 2948 aa23.21■■□□□ 1.31
PMS1-214ENST00000446877 PRMT5O14744 637 aaPredicted RBP23.2■■□□□ 1.3
PMS1-214ENST00000446877 KPNA5O15131 536 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 C1orf105O95561 183 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 CCNFP41002 786 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 CA7P43166 264 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 RNF44Q7L0R7 432 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 TC2NQ8N9U0 490 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 HMGCLL1Q8TB92 370 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 MAGEC3Q8TD91 643 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 PANX3Q96QZ0 392 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 ZFYVE21Q9BQ24 234 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 SH3BGRL2Q9UJC5 107 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 AKAP9Q99996 3911 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 SNRNP200O75643 2136 aaKnown RBP23.2■■□□□ 1.3
PMS1-214ENST00000446877 CSMD2Q7Z408 3487 aa23.2■■□□□ 1.3
PMS1-214ENST00000446877 F8P00451 2351 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 IGHV1-45A0A0A0MS14 117 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 E7EVH7 732 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 IPO7O95373 1038 aaKnown RBP23.19■■□□□ 1.3
PMS1-214ENST00000446877 WDPCPO95876 746 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 ICAM2P13598 275 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 CMPK1P30085 196 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 TTPAP49638 278 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 DSG2Q14126 1118 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 SEMA3AQ14563 771 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 ABHD17BQ5VST6 288 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 FAAH2Q6GMR7 532 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 OR2A1Q8NGT9 310 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 C10orf90Q96M02 699 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 CATSPERZQ9NTU4 200 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 C14orf105Q9NVL8 296 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 DUSP10Q9Y6W6 482 aa23.19■■□□□ 1.3
PMS1-214ENST00000446877 A0A1W2PQ72 361 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 PRAMEF2O60811 474 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 VPS26AO75436 327 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 ANXA5P08758 320 aa23.18■■□□□ 1.3
PMS1-214ENST00000446877 MST1P26927 711 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms