RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LRRC56Q8IYG6 542 aaPredicted RBP16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CLIP3Q96DZ5 547 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 EFHD1Q9BUP0 239 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 PCBD2Q9H0N5 130 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 ATG10Q9H0Y0 220 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 ACTR5Q9H9F9 607 aaPredicted RBP16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 CPNE5Q9HCH3 593 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 EURLQ9NYK6 297 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 ANKMY1Q9P2S6 941 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 IKZF3Q9UKT9 509 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 PADI1Q9ULC6 663 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.28
SMARCAL1-209ENST00000444508 GUCA1CO95843 209 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 STAT5AP42229 794 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 PMS2P54278 862 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 ATP6V0D1P61421 351 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 NAE1Q13564 534 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 BMPR2Q13873 1038 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 MROH9Q5TGP6 573 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 PRAMEF13Q5VWM6 474 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 CMC1Q7Z7K0 106 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 MCATQ8IVS2 390 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 ZSCAN1Q8NBB4 408 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 UHMK1Q8TAS1 419 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 ALKBH8Q96BT7 664 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 FBXL8Q96CD0 374 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 GPN2Q9H9Y4 310 aaPredicted RBP16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 SLC6A20Q9NP91 592 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 SNX7Q9UNH6 387 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 AP1M2Q9Y6Q5 423 aa16.76■□□□□ 0.27
SMARCAL1-209ENST00000444508 OR2A25A4D2G3 310 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 ZSCAN9O15535 394 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 ZNF749O43361 778 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 HCRTR1O43613 425 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 WISP3O95389 354 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 KLK3P07288 261 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 ANXA5P08758 320 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 ABHD2P08910 425 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 MSH2P43246 934 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 YBX1P67809 324 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 VAC14Q08AM6 782 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 CSHL1Q14406 222 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 TSNQ15631 228 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 PPP1R3AQ16821 1122 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 PRAMEF17Q5VTA0 474 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 CAPN13Q6MZZ7 669 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 TLDC1Q6P9B6 456 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 ADCK2Q7Z695 626 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 CCDC91Q7Z6B0 441 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 TBC1D1Q86TI0 1168 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 GSPT2Q8IYD1 628 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 SPATA6LQ8N4H0 392 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 SLC44A1Q8WWI5 657 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 LRFN5Q96NI6 719 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 PAFAH2Q99487 392 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 EGFL8Q99944 293 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 SELENOSQ9BQE4 189 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 PLCD4Q9BRC7 762 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 SPRTNQ9H040 489 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 LHX9Q9NQ69 397 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 TLK1Q9UKI8 766 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 OARD1Q9Y530 152 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 SPTBP11277 2137 aa16.75■□□□□ 0.27
SMARCAL1-209ENST00000444508 CFAP47Q6ZTR5 3102 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 LOC101059948A0A1B0GTJ6 334 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 POC1B-GALNT4F8VUJ3 575 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 EFSO43281 561 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 CTSVO60911 334 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SLU7O95391 586 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SLC35E2BP0CK96 405 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 LIFP15018 202 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 CD1DP15813 335 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 HRH2P25021 359 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 TNFRSF8P28908 595 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SERPINB8P50452 374 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SERPINB9P50453 376 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 CDKL1Q00532 357 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SRSF6Q13247 344 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 TAF1BQ53T94 588 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 TCTE1Q5JU00 501 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 ARHGAP40Q5TG30 622 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 C17orf64Q86WR6 236 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 MR1Q95460 341 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 CRELD1Q96HD1 420 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 UBXN10Q96LJ8 280 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 ZFYVE21Q9BQ24 234 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 HAUS8Q9BT25 410 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 NDC1Q9BTX1 674 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SGPP1Q9BX95 441 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 PRORYQ9H606 182 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 CROTQ9UKG9 612 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 SRPK3Q9UPE1 567 aa16.74■□□□□ 0.27
SMARCAL1-209ENST00000444508 LHX6Q9UPM6 363 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms