RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ATP13A3Q9H7F0 1226 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 SIAEQ9HAT2 523 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 INTS6Q9UL03 887 aaKnown RBP11.33□□□□□ -0.6
HCFC1-203ENST00000444191 DHRS7Q9Y394 339 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PMF1-BGLAPU3KQ54 211 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 OR7A17O14581 309 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 TNFRSF10BO14763 440 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PEX11BO96011 259 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ANXA4P09525 319 aaPredicted RBP11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PTNP21246 168 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PSMD8P48556 350 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 CREMQ03060 361 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 TUBA3CQ13748 450 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 CARD16Q5EG05 197 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 DGKKQ5KSL6 1271 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ARMC8Q8IUR7 673 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 SIX5Q8N196 739 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 OR4A15Q8NGL6 344 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 PHF10Q8WUB8 498 aaKnown RBP11.33□□□□□ -0.6
HCFC1-203ENST00000444191 TANKQ92844 425 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 MTERF3Q96E29 417 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 NEURL2Q9BR09 285 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 CRISPLD1Q9H336 500 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 SNTG1Q9NSN8 517 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ENPP5Q9UJA9 477 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 ACSL6Q9UKU0 697 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 FZD4Q9ULV1 537 aa11.33□□□□□ -0.6
HCFC1-203ENST00000444191 C2orf78A6NCI8 922 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SMAD6O43541 496 aaKnown RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SNX4O95219 450 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CSF2P04141 144 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 OR56A5P0C7T3 313 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CKMT1AP12532 417 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ZNF140P52738 457 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 GP2P55259 537 aaKnown RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 MEF2AQ02078 507 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 IER5LQ5T953 404 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 PTCHD4Q6ZW05 846 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TMPRSS11BQ86T26 416 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ANKRD13BQ86YJ7 626 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 OR9Q1Q8NGQ5 310 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CHPT1Q8WUD6 406 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TSPAN18Q96SJ8 248 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TUBA1CQ9BQE3 449 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CD244Q9BZW8 370 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 MIEF1Q9NQG6 463 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TRPC4Q9UBN4 977 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CACNG3O60359 315 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SEC14L2O76054 403 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 EPOP01588 193 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TNNI3P19429 210 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 STK19P49842 368 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 DSC3Q14574 896 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ZNF404Q494X3 552 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 B3GNT8Q7Z7M8 397 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ZNF548Q8NEK5 533 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 BPIFB1Q8TDL5 484 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SGK2Q9HBY8 427 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RAD18Q9NS91 495 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 ANKDD1BA6NHY2 528 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 C1QCP02747 245 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CAMK2GQ13555 558 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TMEM159Q96B96 161 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 OTUB1Q96FW1 271 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 CITED4Q96RK1 184 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 PKP4Q99569 1192 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 FEVQ99581 238 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 OR51E2Q9H255 320 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 DSN1Q9H410 356 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 TIGARQ9NQ88 270 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 SLC25A37Q9NYZ2 338 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 HECAQ9UBI9 543 aaPredicted RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 LSM7Q9UK45 103 aaKnown RBP11.32□□□□□ -0.6
HCFC1-203ENST00000444191 RNF6Q9Y252 685 aa11.32□□□□□ -0.6
HCFC1-203ENST00000444191 KLHL20Q9Y2M5 609 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms