RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SERPINB1P30740 379 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 S100A3P33764 101 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 TRIM23P36406 574 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 LTBRP36941 435 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 MKI67P46013 3256 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 ASMTP46597 345 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 LIPEQ05469 1076 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 ACSM2AQ08AH3 577 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 MAPKAPK3Q16644 382 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 HIST2H2ACQ16777 129 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 AAK1Q2M2I8 961 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 GRAMD1BQ3KR37 738 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 FBXO43Q4G163 708 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 SPANXN4Q5MJ08 99 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PRAMEF9Q5VWM5 478 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 ACSM2BQ68CK6 577 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 HIST2H2AA3Q6FI13 130 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 IRGCQ6NXR0 463 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 SLCO4C1Q6ZQN7 724 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 FAM83HQ6ZRV2 1179 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PROSER1Q86XN7 944 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PDSS2Q86YH6 399 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 KBTBD2Q8IY47 623 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 IL17RCQ8NAC3 791 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 SETD7Q8WTS6 366 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 SLC5A11Q8WWX8 675 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 FOXJ1Q92949 421 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 POP5Q969H6 163 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 SLC45A3Q96JT2 553 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 APOLD1Q96LR9 279 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 CCDC115Q96NT0 180 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 BTBD9Q96Q07 612 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PCBD2Q9H0N5 130 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PCDHAC1Q9H158 963 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 TRIT1Q9H3H1 467 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 Q9H521 79 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PPT2Q9UMR5 302 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 ZFR2Q9UPR6 939 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 NCKAP1Q9Y2A7 1128 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 DLGAP4Q9Y2H0 992 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM98Q9Y2Y6 226 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 AP4S1Q9Y587 144 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 A0A096LPI6 279 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 A0A1W2PQU0 124 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 DHRS12A0PJE2 317 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 PIPSLA2A3N6 862 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 CACNB4O00305 520 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 RNGTTO60942 597 aaKnown RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 EGFP01133 1207 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 RPSAP08865 295 aaKnown RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 GLULP15104 373 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 IGFALSP35858 605 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 HPCAL1P37235 193 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 KIAA1024LP59773 190 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 TAP2Q03519 686 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 SLBPQ14493 270 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 PON2Q15165 354 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 CYP2A13Q16696 494 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 SLC44A4Q53GD3 710 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 RABL3Q5HYI8 236 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 EOGTQ5NDL2 527 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 NANOGP8Q6NSW7 305 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 KIAA1211LQ6NV74 962 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 NOXRED1Q6NXP6 359 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 DLEU7Q6UYE1 221 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 RNF111Q6ZNA4 994 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 LAS2Q8IYD9 372 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 LRRC56Q8IYG6 542 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 ICA1LQ8NDH6 482 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 OR5K2Q8NHB8 316 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 OR14C36Q8NHC7 312 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 DNAJB14Q8TBM8 379 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 TFGQ92734 400 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 NEIL2Q969S2 332 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 CXorf40BQ96DE9 158 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 MTFMTQ96DP5 389 aaKnown RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 APIPQ96GX9 242 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 ITCHQ96J02 903 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 MKRN2Q9H000 416 aaKnown RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 NANOGQ9H9S0 305 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 PELI2Q9HAT8 420 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 BATF3Q9NR55 127 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 ARMC1Q9NVT9 282 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 FAM120CQ9NX05 1096 aaKnown RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-206ENST00000441580 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 MTCH2Q9Y6C9 303 aa12.74□□□□□ -0.37
CPSF4-206ENST00000441580 TRPM6Q9BX84 2022 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 A0A1W2PQF6 199 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 ANTXRLA6NF34 631 aa12.73□□□□□ -0.37
CPSF4-206ENST00000441580 FOXE1O00358 373 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-206ENST00000441580 KDM1AO60341 852 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms