RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MIEF2Q96C03 454 aa19.82■□□□□ 0.76
CPNE1-219ENST00000440240 CRB3Q9BUF7 120 aa19.82■□□□□ 0.76
CPNE1-219ENST00000440240 EPS8L2Q9H6S3 715 aa19.82■□□□□ 0.76
CPNE1-219ENST00000440240 ZNF282Q9UDV7 671 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-219ENST00000440240 RUVBL2Q9Y230 463 aaKnown RBP19.82■□□□□ 0.76
CPNE1-219ENST00000440240 MAU2Q9Y6X3 613 aa19.82■□□□□ 0.76
CPNE1-219ENST00000440240 EIF2S1P05198 315 aaKnown RBP19.81■□□□□ 0.76
CPNE1-219ENST00000440240 ERVK-10P10266 1014 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 CHRM3P20309 590 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 MGAT1P26572 445 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 PSMB5P28074 263 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 EMP3P54852 163 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 ANKRD20A4Q4UJ75 823 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 RNF44Q7L0R7 432 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 METTL27Q8N6F8 245 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-219ENST00000440240 STT3BQ8TCJ2 826 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 MFSD3Q96ES6 412 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 ZFYVE21Q9BQ24 234 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 DPH7Q9BTV6 452 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 HOMER3Q9NSC5 361 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 CDC14AQ9UNH5 594 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 NOVA2Q9UNW9 492 aaKnown RBP19.81■□□□□ 0.76
CPNE1-219ENST00000440240 NTNG1Q9Y2I2 539 aa19.81■□□□□ 0.76
CPNE1-219ENST00000440240 MDC1Q14676 2089 aaKnown RBP19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ITPR2Q14571 2701 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 LOC105369274A0A096LPK9 316 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 LOC102723532A0A0G2JNH3 316 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 A0A1W2PPV9 198 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 OR2A25A4D2G3 310 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 PHF2O75151 1096 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ALOX12BO75342 701 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 FGGP02679 453 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ZGLP1P0C6A0 271 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ARNTP27540 789 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 TSFMP43897 325 aaKnown RBP19.8■□□□□ 0.76
CPNE1-219ENST00000440240 SARNPP82979 210 aaKnown RBP19.8■□□□□ 0.76
CPNE1-219ENST00000440240 KLC1Q07866 573 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 GBX1Q14549 363 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 TLR1Q15399 786 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 TYSND1Q2T9J0 566 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ARMC3Q5W041 872 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 B3GNTL1Q67FW5 361 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-219ENST00000440240 FBXO42Q6P3S6 717 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 CES3Q6UWW8 571 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ISLR2Q6UXK2 745 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 KCNMB4Q86W47 210 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 OR4N4Q8N0Y3 316 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 ST6GALNAC3Q8NDV1 305 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 OR9A1PQ8NGU1 263 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 SMPDL3AQ92484 453 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 LPGAT1Q92604 370 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 THOC3Q96J01 351 aaKnown RBP19.8■□□□□ 0.76
CPNE1-219ENST00000440240 LMF1Q96S06 567 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 SOX13Q9UN79 622 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 VPS9D1Q9Y2B5 631 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 CSAG2Q9Y5P2 127 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 MYO9AB2RTY4 2548 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 DOCK10Q96BY6 2186 aa19.8■□□□□ 0.76
CPNE1-219ENST00000440240 CREBBPQ92793 2442 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 KRT87PA6NCN2 255 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 NIPSNAP2O75323 286 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 HPP00738 406 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 ACPPP15309 386 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 TPSB2P20231 275 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 HSD17B2P37059 387 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 FASTKQ14296 549 aaKnown RBP19.79■□□□□ 0.76
CPNE1-219ENST00000440240 ZNF169Q14929 603 aaPredicted RBP19.79■□□□□ 0.76
CPNE1-219ENST00000440240 ARHGAP19Q14CB8 494 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 TPSAB1Q15661 275 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 ACAT2Q9BWD1 397 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 FAM114A2Q9NRY5 505 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 SYBUQ9NX95 663 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 UTP6Q9NYH9 597 aaKnown RBP19.79■□□□□ 0.76
CPNE1-219ENST00000440240 C3orf18Q9UK00 162 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 CRYL1Q9Y2S2 319 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 PCM1Q15154 2024 aa19.79■□□□□ 0.76
CPNE1-219ENST00000440240 IGLV3-12A0A075B6K2 115 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 ZNF839A8K0R7 811 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 GOLGA8KD6RF30 607 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 GOLGA8TH3BQL2 631 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 MAP2K7O14733 419 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 PRPF4O43172 522 aaKnown RBP eCLIP19.78■□□□□ 0.762e-8■□□□□ 11.3
CPNE1-219ENST00000440240 VPS26AO75436 327 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 ERGP11308 486 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 PAMP19021 973 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 OGNP20774 298 aaKnown RBP19.78■□□□□ 0.76
CPNE1-219ENST00000440240 RPA3P35244 121 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-219ENST00000440240 KCNJ1P48048 391 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 CDC16Q13042 620 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 PRTGQ2VWP7 1150 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 ATG9BQ674R7 924 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 DTWD1Q8N5C7 304 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 MVB12AQ96EY5 273 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 CABS1Q96KC9 395 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 PLCD4Q9BRC7 762 aa19.78■□□□□ 0.76
CPNE1-219ENST00000440240 MRPS30Q9NP92 439 aaKnown RBP19.78■□□□□ 0.76
CPNE1-219ENST00000440240 MAGEB16A2A368 324 aa19.77■□□□□ 0.76
CPNE1-219ENST00000440240 E5RI56 91 aa19.77■□□□□ 0.76
CPNE1-219ENST00000440240 H0YGG7 62 aa19.77■□□□□ 0.76
CPNE1-219ENST00000440240 PSIP1O75475 530 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms