RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 INHBCP55103 352 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 MN1Q10571 1320 aaPredicted RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SQSTM1Q13501 440 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 MPP2Q14168 576 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 HSP90B2PQ58FF3 399 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 ICE2Q659A1 982 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 LCTLQ6UWM7 567 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 C17orf64Q86WR6 236 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 TEX9Q8N6V9 391 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 CCNYL1Q8N7R7 359 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 OR2L3Q8NG85 312 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 FLVCR1-AS1Q8TAF5 88 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 PPP4R1Q8TF05 950 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 MOCOSQ96EN8 888 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 TMEM74Q96NL1 305 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 OR4K3Q96R72 315 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 HAUS8Q9BT25 410 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SGPP1Q9BX95 441 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 RAB33BQ9H082 229 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 PCBD2Q9H0N5 130 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 DNAJC11Q9NVH1 559 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 CUEDC1Q9NWM3 386 aaPredicted RBP14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SOHLH2Q9NX45 425 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 DLL3Q9NYJ7 618 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 COPG2Q9UBF2 871 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 CLCA2Q9UQC9 943 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 SH2B3Q9UQQ2 575 aa14.79□□□□□ -0.04
CNOT9-205ENST00000433439 PCM1Q15154 2024 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 IGHV5-51A0A0C4DH38 117 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 FAM149AA5PLN7 773 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 STX16-NPEPL1H3BU86 382 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 STX16O14662 325 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 PRPF4O43172 522 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■■■□ 21.2
CNOT9-205ENST00000433439 PRAMEF10O60809 474 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 CSO75390 466 aaKnown RBP14.78□□□□□ -0.04
CNOT9-205ENST00000433439 SUPT7LO94864 414 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 ZWINTO95229 277 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 CCNDBP1O95273 360 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 THRAP10827 490 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 NEFHP12036 1026 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 JUPP14923 745 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 ST6GAL1P15907 406 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 NPPBP16860 134 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 MAGP20916 626 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 GGT5P36269 586 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 PRDX1Q06830 199 aaKnown RBP14.78□□□□□ -0.04
CNOT9-205ENST00000433439 CLPPQ16740 277 aaPredicted RBP14.78□□□□□ -0.04
CNOT9-205ENST00000433439 SLC5A12Q1EHB4 618 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 HHATQ5VTY9 493 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 RPS27LQ71UM5 84 aaKnown RBP14.78□□□□□ -0.04
CNOT9-205ENST00000433439 LRRC70Q7Z2Q7 622 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 TMPRSS11BQ86T26 416 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 SLC22A9Q8IVM8 553 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 C10orf107Q8IVU9 208 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 RDH11Q8TC12 318 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 PKNOX2Q96KN3 472 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 DEPDC7Q96QD5 511 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 CD180Q99467 661 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 DPH7Q9BTV6 452 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 MECRQ9BV79 373 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 SLC6A20Q9NP91 592 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 C1GALT1Q9NS00 363 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 NKIRAS1Q9NYS0 192 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 TNPO3Q9Y5L0 923 aaKnown RBP14.78□□□□□ -0.04
CNOT9-205ENST00000433439 KCNE2Q9Y6J6 123 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 ZNF292O60281 2723 aa14.78□□□□□ -0.04
CNOT9-205ENST00000433439 H7BY64 318 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 K7EPI3 171 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 CLGNO14967 610 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 TM9SF1O15321 606 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 CDH1P12830 882 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 TSPAN8P19075 237 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 ALDH3A1P30838 453 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 GRIA3P42263 894 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PDX1P52945 283 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PRKAA2P54646 552 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 CDC16Q13042 620 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 GPS2Q13227 327 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 GTF2H2Q13888 395 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PCLAFQ15004 111 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PCBP2Q15366 365 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■□□□□ 8.5
CNOT9-205ENST00000433439 PDK4Q16654 411 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 ISXQ2M1V0 245 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 GTF2H2CQ6P1K8 395 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 FIGLAQ6QHK4 219 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 MARCH9Q86YJ5 346 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 SLITRK4Q8IW52 837 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 CHCHD4Q8N4Q1 142 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 UBTD2Q8WUN7 234 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 SLC5A11Q8WWX8 675 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 NEIL2Q969S2 332 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 ATP6V1E2Q96A05 226 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 CCDC126Q96EE4 140 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PRAP1Q96NZ9 151 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 NSUN5Q96P11 429 aaKnown RBP14.77□□□□□ -0.05
CNOT9-205ENST00000433439 TRAPPC9Q96Q05 1148 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 TMEM237Q96Q45 408 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 PRM3Q9NNZ6 103 aa14.77□□□□□ -0.05
CNOT9-205ENST00000433439 SEMA4BQ9NPR2 832 aaPredicted RBP14.77□□□□□ -0.05
CNOT9-205ENST00000433439 E7EQ34 232 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms