RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 DCAF7P61962 342 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TAF10Q12962 218 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 COL9A3Q14050 684 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM154Q6P9G4 183 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PAPD5Q8NDF8 572 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NPLOC4Q8TAT6 608 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SLC6A16Q9GZN6 736 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PCDHB16Q9NRJ7 776 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NCKAP1Q9Y2A7 1128 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NPFFR2Q9Y5X5 522 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SPTBP11277 2137 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 INTS1Q8N201 2190 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 MTMR11A4FU01 709 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SEC22BO75396 215 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 S1PR4O95977 384 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 HLA-DQB2P05538 268 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PCGF2P35227 344 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 DGKGP49619 791 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 LIPEQ05469 1076 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 RAB40BQ12829 278 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TRIM60Q495X7 471 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 LRIF1Q5T3J3 769 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 OTUD1Q5VV17 481 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FAM220AQ7Z4H9 259 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SLC43A3Q8NBI5 491 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GRIN3AQ8TCU5 1115 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 POF1BQ8WVV4 589 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 OSTF1Q92882 214 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PSMG2Q969U7 264 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ISOC1Q96CN7 298 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ZHX1-C8orf76Q96EF9 292 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 POM121Q96HA1 1249 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SORT1Q99523 831 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GPATCH1Q9BRR8 931 aaKnown RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 WDR55Q9H6Y2 383 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 AIG1Q9NVV5 245 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 KLK4Q9Y5K2 254 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PKD1L2Q7Z442 2459 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 TET1Q8NFU7 2136 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CLCA1A8K7I4 914 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PDZK1P1A8MUH7 402 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 KPNA3O00505 521 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PDCD5O14737 125 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SPTLC1O15269 473 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PPM1BO75688 479 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 UGT2B15P54855 530 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF252P-AS1Q0IIN9 211 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 ILF3Q12906 894 aaKnown RBP eCLIP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 SGCGQ13326 291 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 KCTD20Q7Z5Y7 419 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 CCDC24Q8N4L8 307 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 PANX1Q96RD7 426 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 GORASP1Q9BQQ3 440 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FEM1AQ9BSK4 669 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 BHLHE41Q9C0J9 482 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-205ENST00000433355 VPS29Q9UBQ0 182 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 FZD4Q9ULV1 537 aa3.67□□□□□ -1.82
SHPRH-205ENST00000433355 NR5A2O00482 541 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 PRAF2O60831 178 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 FOXN2P32314 431 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SHMT2P34897 504 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 TNFSF9P41273 254 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ARCN1P48444 511 aaKnown RBP3.66□□□□□ -1.82
SHPRH-205ENST00000433355 TDGQ13569 410 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 DOC2AQ14183 400 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 AP5B1Q2VPB7 878 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 CHERPQ8IWX8 916 aaKnown RBP3.66□□□□□ -1.82
SHPRH-205ENST00000433355 HDAC10Q969S8 669 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 PHF21AQ96BD5 680 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 NELL2Q99435 816 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 MCMBPQ9BTE3 642 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 MND1Q9BWT6 205 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 HDAC8Q9BY41 377 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SLITRK2Q9H156 845 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SLCO5A1Q9H2Y9 848 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ASB8Q9H765 288 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 IGLV3-16A0A075B6K0 115 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SYNJ2BP-COX16A0A087WUM0 186 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ADAMTS3O15072 1205 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SEC14L5O43304 696 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 GPRIN2O60269 458 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 PRSS23O95084 383 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 LY86O95711 162 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 IGF2P01344 180 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 GGT1P19440 569 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ACRV1P26436 265 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 EPHA3P29320 983 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 NR4A2P43354 598 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 FLT3LGP49771 235 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 AP2S1P53680 142 aaPredicted RBP3.66□□□□□ -1.82
SHPRH-205ENST00000433355 SP2Q02086 613 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 NR1D2Q14995 579 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 C6orf136Q5SQH8 315 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF776Q68DI1 518 aaPredicted RBP3.66□□□□□ -1.82
SHPRH-205ENST00000433355 ARMC6Q6NXE6 501 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 LLGL2Q6P1M3 1020 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 MED27Q6P2C8 311 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 TMC5Q6UXY8 1006 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 NPAS3Q8IXF0 933 aa3.66□□□□□ -1.82
SHPRH-205ENST00000433355 IRF7Q92985 503 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms