RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PTPRTO14522 1441 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF263O14978 683 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ARPC2O15144 300 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PPIP5K2O43314 1243 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 KCNAB3O43448 404 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 NME6O75414 186 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LUC7L3O95232 432 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PIGNO95427 931 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 BAG3O95817 575 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TSHBP01222 138 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 C9P02748 559 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 RLN1P04808 185 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 FRMD6-AS1P0C7T7 363 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGHV4-31P0DP07 118 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGHV4-38-2P0DP08 117 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LIFP15018 202 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PAX1P15863 534 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 EFNA1P20827 205 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 MARK3P27448 753 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 NKX2-1P43699 371 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PDX1P52945 283 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNU13P55769 128 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ST8SIA6P61647 398 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 RPS18P62269 152 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TAF10Q12962 218 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 COASYQ13057 564 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ODF4Q2M2E3 257 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SMU1Q2TAY7 513 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC39A12Q504Y0 691 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ODF2Q5BJF6 829 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LRRC73Q5JTD7 316 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF324BQ6AW86 544 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 FAM166AQ6J272 317 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TATDN1Q6P1N9 297 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF449Q6P9G9 518 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 CORO6Q6QEF8 472 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 KCTD8Q6ZWB6 473 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPR141Q7Z602 305 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SMIM29Q86T20 159 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 DZIP1Q86YF9 867 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 CREBRFQ8IUR6 639 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 C4orf19Q8IY42 314 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 CFAP206Q8IYR0 622 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 CIARTQ8N365 385 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 RFLNBQ8N5W9 214 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TMCO5AQ8N6Q1 288 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLHDC9Q8NEP7 349 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR4K1Q8NGD4 311 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR1J1Q8NGS3 322 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 NCOA7Q8NI08 942 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LMO3Q8TAP4 145 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SAP25Q8TEE9 199 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PHLDA1Q8WV24 401 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 NUDCD2Q8WVJ2 157 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SECTM1Q8WVN6 248 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 EXOC4Q96A65 974 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZBTB9Q96C00 473 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SGF29Q96ES7 293 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGSF21Q96ID5 467 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 GDAP1L1Q96MZ0 367 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ATP6V0BQ99437 205 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZPBPQ9BS86 351 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PI4K2AQ9BTU6 479 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 GTPBP2Q9BX10 602 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 UACAQ9BZF9 1416 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 MMADHCQ9H3L0 296 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 ACTL8Q9H568 366 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TLE6Q9H808 572 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 MID1IP1Q9NPA3 183 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 FGF21Q9NSA1 209 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 IARS2Q9NSE4 1012 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC38A7Q9NVC3 462 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 TXNDC16Q9P2K2 825 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC7A7Q9UM01 511 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 PA2G4Q9UQ80 394 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 KNSTRNQ9Y448 316 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 JRKLQ9Y4A0 524 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 RPGRIP1LQ68CZ1 1315 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 MAGI3Q5TCQ9 1506 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 SCN5AQ14524 2016 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 TSPOAP1O95153 1857 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 A0A1W2PPW3 197 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRIM64A6NGJ6 449 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRIM64BA6NI03 449 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 LACTBL1A8MY62 500 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 F8VVB4 439 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 F8VWA3 439 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 OVOL3O00110 214 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 PAPSS2O95340 614 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 OLFM2O95897 454 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 GH1P01241 217 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ANKRD34CP0C6C1 535 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 UROSP10746 265 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ITIH1P19827 911 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 JAK1P23458 1154 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 DGKAP23743 735 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 HSPA1LP34931 641 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 SOAT1P35610 550 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 MNDAP41218 407 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 IER3P46695 156 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms