RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ETHE1O95571 254 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 B3GALT4O96024 378 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SDC1P18827 310 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 PLOD1Q02809 727 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 FOXM1Q08050 763 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SELPLGQ14242 412 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 THEMIS2Q5TEJ8 643 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 DNAJC14Q6Y2X3 702 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SLCO4C1Q6ZQN7 724 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 RALGPS2Q86X27 583 aaPredicted RBP16.13■□□□□ 0.17
USHBP1-203ENST00000431146 DHFR2Q86XF0 187 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 LILRA2Q8N149 483 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 PQLC1Q8N2U9 271 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 RPLP0P6Q8NHW5 317 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 SIPA1Q96FS4 1042 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 ACAT2Q9BWD1 397 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 OSGEPL1Q9H4B0 414 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 CLMPQ9H6B4 373 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 ASIC5Q9NY37 505 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 PLEKHM1Q9Y4G2 1056 aa16.13■□□□□ 0.17
USHBP1-203ENST00000431146 PGRP06401 933 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 GRIA3P42263 894 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 GSK3BP49841 420 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 CLCNKAP51800 687 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 PNLIPRP1P54315 467 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 MTPNP58546 118 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 LIPEQ05469 1076 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 TRAP1Q12931 704 aaKnown RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 METRNLQ641Q3 311 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 TMEM92Q6UXU6 159 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 LRRC56Q8IYG6 542 aaPredicted RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 OR7G3Q8NG95 312 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 FAM110BQ8TC76 370 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 ALG2Q9H553 416 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 PHPT1Q9NRX4 125 aaPredicted RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 TMEM45AQ9NWC5 275 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 WDR37Q9Y2I8 494 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 EIF4E1BA6NMX2 242 aaKnown RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 KMOO15229 486 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 HSD17B1P14061 328 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 HNF4AP41235 474 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 TCEA2Q15560 299 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 KIAA1161Q6NSJ0 714 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 NOXRED1Q6NXP6 359 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 TLDC1Q6P9B6 456 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 KIAA1324Q6UXG2 1013 aaKnown RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 USP34Q70CQ2 3546 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 SPPL2CQ8IUH8 684 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 OXR1Q8N573 874 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 DPP10Q8N608 796 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 HUS1BQ8NHY5 278 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 ZNF184Q99676 751 aaPredicted RBP16.12■□□□□ 0.17
USHBP1-203ENST00000431146 SGPP1Q9BX95 441 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 SPNS1Q9H2V7 528 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 IRAK4Q9NWZ3 460 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 VPS29Q9UBQ0 182 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 KCNK6Q9Y257 313 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 CA5BQ9Y2D0 317 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 NEUROG3Q9Y4Z2 214 aa16.12■□□□□ 0.17
USHBP1-203ENST00000431146 DYTNA2CJ06 578 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 ZNF839A8K0R7 811 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 H0YIV9 168 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 DFNA5O60443 496 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 C8BP07358 591 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 MTHFD1P11586 935 aaKnown RBP16.11■□□□□ 0.17
USHBP1-203ENST00000431146 MYCLP1P12525 358 aaPredicted RBP16.11■□□□□ 0.17
USHBP1-203ENST00000431146 NCK1P16333 377 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 ATP6V1C1P21283 382 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 PRPH2P23942 346 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 PHC1P78364 1004 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 TFF2Q03403 129 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 MAPKAPK3Q16644 382 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 ZFP1Q6P2D0 407 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 UNC5DQ6UXZ4 953 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 HID1Q8IV36 788 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 CDC26Q8NHZ8 85 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 GTF2H4Q92759 462 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 FAM131CQ96AQ9 280 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 MRGPRX1Q96LB2 322 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 MAGEB10Q96LZ2 347 aaPredicted RBP16.11■□□□□ 0.17
USHBP1-203ENST00000431146 LRGUKQ96M69 825 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 OR52E6Q96RD3 313 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 PKP2Q99959 881 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 KCTD14Q9BQ13 255 aaPredicted RBP16.11■□□□□ 0.17
USHBP1-203ENST00000431146 CCDC177Q9NQR7 707 aaPredicted RBP16.11■□□□□ 0.17
USHBP1-203ENST00000431146 VAPAQ9P0L0 249 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 PPT2Q9UMR5 302 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 DYRK1BQ9Y463 629 aa16.11■□□□□ 0.17
USHBP1-203ENST00000431146 PRSS51A0A1B0GVH4 220 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 AKAP10O43572 662 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CEACAM5P06731 702 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 DRD1P21728 446 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CCR3P51677 355 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CLDN2P57739 230 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RHDQ02161 417 aa16.1■□□□□ 0.17
USHBP1-203ENST00000431146 CSTF3Q12996 717 aaKnown RBP16.1■□□□□ 0.17
USHBP1-203ENST00000431146 RPA4Q13156 261 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms