RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZFAND2BQ8WV99 257 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ITCHQ96J02 903 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 LINC00615Q96LM1 132 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 RNF145Q96MT1 663 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CD320Q9NPF0 282 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 GPRC5BQ9NZH0 403 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 K7ESM1 405 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 C1orf105O95561 183 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 NFATC1O95644 943 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 SLC16A8O95907 504 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 HLA-EP13747 358 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF23P17027 643 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 MAP4P27816 1152 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 GSTT1P30711 240 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 RPS9P46781 194 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 NR1H2P55055 460 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 ADARB1P78563 741 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 ELP6Q0PNE2 266 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 EIF4HQ15056 248 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 UGT8Q16880 541 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 TMEM52BQ4KMG9 183 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 FAM98BQ52LJ0 330 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 ENPP6Q6UWR7 440 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 FKBP9P1Q75LS8 142 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 SFTPA1Q8IWL2 248 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 PHACTR4Q8IZ21 702 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 FAM47BQ8NA70 645 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 TSPAN14Q8NG11 270 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 WDR34Q96EX3 536 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 BDH2Q9BUT1 245 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 THUMPD3Q9BV44 507 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 BRF2Q9HAW0 419 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.25
HOXC4-202ENST00000430889 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 PCDHGA11Q9Y5H2 935 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 V9GYQ6 96 aa13.52□□□□□ -0.25
HOXC4-202ENST00000430889 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 CXCR6O00574 342 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 DEAF1O75398 565 aaPredicted RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 RECQL5O94762 991 aaPredicted RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 C6P13671 934 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ADRB3P13945 408 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 PRPS1L1P21108 318 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 FCARP24071 287 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 CAPGP40121 348 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 PEX19P40855 299 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 TUBA4AP68366 448 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 RAE1P78406 368 aaKnown RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ELAVL3Q14576 367 aaKnown RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 PON2Q15165 354 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 DPY19L1Q2PZI1 675 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 XKR6Q5GH73 641 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF547Q8IVP9 402 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 LRRC56Q8IYG6 542 aaPredicted RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 OR8J2Q8NGG1 315 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 OR8D1Q8WZ84 308 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 FIG4Q92562 907 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 SMARCD2Q92925 531 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 DGCR14Q96DF8 476 aaKnown RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 NUS1Q96E22 293 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 RMND5BQ96G75 393 aaPredicted RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 AURKBQ96GD4 344 aaPredicted RBP13.51□□□□□ -0.25
HOXC4-202ENST00000430889 GRIP2Q9C0E4 1043 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 TRPV4Q9HBA0 871 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ADGRE2Q9UHX3 823 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 HCN2Q9UL51 889 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 INVSQ9Y283 1065 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 DOCK8Q8NF50 2099 aa13.51□□□□□ -0.25
HOXC4-202ENST00000430889 HEPACAM2A8MVW5 462 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CREG1O75629 220 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ETHE1O95571 254 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ATP6V1B1P15313 513 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TRPC1P48995 793 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CHRNB3Q05901 458 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 SLC14A1Q13336 389 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ZNF234Q14588 700 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 OR4F3Q6IEY1 312 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 KRT80Q6KB66 452 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 SLCO4C1Q6ZQN7 724 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
HOXC4-202ENST00000430889 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 GPR180Q86V85 440 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 ADAMTS16Q8TE57 1224 aa13.5□□□□□ -0.25
HOXC4-202ENST00000430889 NELL1Q92832 810 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms