RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FAM174BQ3ZCQ3 159 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SLC44A4Q53GD3 710 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 FBXO48Q5FWF7 155 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 FGD3Q5JSP0 725 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 GPRC6AQ5T6X5 926 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF691Q5VV52 312 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SLC8B1Q6J4K2 584 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 CXorf57Q6NSI4 855 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 RETSATQ6NUM9 610 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 NIPAL1Q6NVV3 410 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SHQ1Q6PI26 577 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 DCDC5Q6ZRR9 648 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 DGLUCYQ7Z3D6 616 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ADGRD2Q7Z7M1 963 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ITIH5Q86UX2 942 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 RNF168Q8IYW5 571 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 LIX1Q8N485 282 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 DCAF4L2Q8NA75 395 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 KLHL23Q8NBE8 558 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 HJURPQ8NCD3 748 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 FBXO30Q8TB52 745 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 LINC01599Q8WXQ3 324 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 STARD8Q92502 1023 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ESAMQ96AP7 390 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 RHBDF1Q96CC6 855 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 VMP1Q96GC9 406 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 TRMT2BQ96GJ1 504 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 RIPOR3Q96MK2 946 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SAMD11Q96NU1 681 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 CDK15Q96Q40 435 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 OR52E6Q96RD3 313 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 MBOAT4Q96T53 435 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 APOL4Q9BPW4 351 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SPATA9Q9BWV2 254 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 KLF16Q9BXK1 252 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 TRIM8Q9BZR9 551 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 LHPPQ9H008 270 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SLC32A1Q9H598 525 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 PIF1Q9H611 641 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 EPS8L2Q9H6S3 715 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 KAT8Q9H7Z6 458 aaKnown RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 TM9SF3Q9HD45 589 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 BPIFA1Q9NP55 256 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 HMG20AQ9NP66 347 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 NECTIN3Q9NQS3 549 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 MARCH5Q9NX47 278 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 SCN3BQ9NY72 215 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ENPP5Q9UJA9 477 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 RPS6KA6Q9UK32 745 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ITGB1BP2Q9UKP3 347 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 BAG5Q9UL15 447 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF490Q9ULM2 529 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ERGIC3Q9Y282 383 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 ASB1Q9Y576 335 aa8.48□□□□□ -1.05
GABPB1-205ENST00000429662 TTC3P53804 2025 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 A0A1W2PQ67 120 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PABPN1LA6NDY0 278 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CLDN25C9JDP6 229 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 H0Y626 953 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PER2O15055 1255 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 GPR37O15354 613 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 COCHO43405 550 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NDUFS2O75306 463 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 E2F6O75461 281 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PRKD3O94806 890 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PRAMEF1O95521 474 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NTRK1P04629 796 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 C8GP07360 202 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ALOX5P09917 674 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 MPC1LP0DKB6 136 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PORP16435 677 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 JUNDP17535 347 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ATF6P18850 670 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 GRK3P35626 688 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 POLR2IP36954 125 aaKnown RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 SPAM1P38567 509 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 DCTP40126 519 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NSG1P42857 185 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 SLC11A1P49279 550 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 HNMTP50135 292 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 BMXP51813 675 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PLA2G16P53816 162 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 ISL1P61371 349 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 BCL2L1Q07817 233 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 VAC14Q08AM6 782 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 BNIP3Q12983 259 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 KCNAB2Q13303 367 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NFATC2Q13469 925 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 COL9A2Q14055 689 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 NR1D2Q14995 579 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 DGUOKQ16854 277 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 PYCR3Q53H96 274 aa8.47□□□□□ -1.05
GABPB1-205ENST00000429662 LCE2AQ5TA79 106 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-205ENST00000429662 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms