RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 B4GALT6Q9UBX8 382 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 ZNF639Q9UID6 485 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 NAALAD2Q9Y3Q0 740 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 KMT2EQ8IZD2 1858 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TSPAN11A1L157 253 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 PRR23AA6NEV1 266 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 STX16-NPEPL1H3BU86 382 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 AP3B1O00203 1094 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 BET1O15155 118 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 CCNKO75909 580 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 NADKO95544 446 aaPredicted RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 TCN1P20061 433 aaPredicted RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 IL10P22301 178 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TARDBPQ13148 414 aaKnown RBP eCLIP11.11□□□□□ -0.63
CECR3-201ENST00000428828 CES3Q6UWW8 571 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 FAM109AQ8N4B1 249 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 RNF148Q8N7C7 305 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 OR6F1Q8NGZ6 308 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 RDH11Q8TC12 318 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 CDKL2Q92772 493 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 COQ7Q99807 217 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 WRAP53Q9BUR4 548 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 IRF2BPLQ9H1B7 796 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 CDYLQ9Y232 598 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 FNDC3AQ9Y2H6 1198 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 PCDHGB1Q9Y5G3 927 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 ARL5AQ9Y689 179 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 ZDBF2Q9HCK1 2354 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 CCRL2O00421 344 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 NEMP1O14524 444 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TRIM13O60858 407 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TIPRLO75663 272 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TSPAN9O75954 239 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 KCNK2O95069 426 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 CLDN7O95471 211 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 APOA4P06727 396 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 GPIP06744 558 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 NAT2P11245 290 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 MLNP12872 115 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 DDOSTP39656 456 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 NKX2-5P52952 324 aaPredicted RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 PRKAA1Q13131 559 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TOP3AQ13472 1001 aaPredicted RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 PIP5KL1Q5T9C9 394 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 AGBL4Q5VU57 503 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 PPHLN1Q8NEY8 458 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 SIGLEC10Q96LC7 697 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 GPR63Q9BZJ6 419 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 MUC13Q9H3R2 512 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 ARNT2Q9HBZ2 717 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 MRM3Q9HC36 420 aaKnown RBP11.11□□□□□ -0.63
CECR3-201ENST00000428828 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 KCTD3Q9Y597 815 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
CECR3-201ENST00000428828 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 RNF103-CHMP3A0A140T963 221 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 FAM86C2PA6NEL3 165 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 E7ENX8 843 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 TPP1O14773 563 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 RAD51BO15315 384 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 TMCC2O75069 709 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 LHCGRP22888 699 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 CXCL12P48061 93 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 NPY2RP49146 381 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 PRIM2P49643 509 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 BNIP2Q12982 314 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 ARHGEF7Q14155 803 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 PTPRCAPQ14761 206 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 LRRC66Q68CR7 880 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 FAM122CQ6P4D5 195 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 TSSK4Q6SA08 328 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 CRTC1Q6UUV9 634 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 OR14C36Q8NHC7 312 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 CYGBQ8WWM9 190 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 FBXL20Q96IG2 436 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 RDH12Q96NR8 316 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 HDAC8Q9BY41 377 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 PCDHAC1Q9H158 963 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 EPHX3Q9H6B9 360 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 BPIFA1Q9NP55 256 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 INTS10Q9NVR2 710 aaKnown RBP11.1□□□□□ -0.63
CECR3-201ENST00000428828 MOSPD1Q9UJG1 213 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 CYP8B1Q9UNU6 501 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
CECR3-201ENST00000428828 PRORSD1PA6NEY8 169 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CENPXA8MT69 81 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CCL22O00626 93 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 SPINT1O43278 529 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 GRID2O43424 1007 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms