RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PRTFDC1Q9NRG1 225 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 ZFR2Q9UPR6 939 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 PCDHGB7Q9Y5F8 929 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 ELOVL7A1L3X0 281 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 NPIPA2E9PIF3 369 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 NPIPA3F8WFD2 350 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 AXIN1O15169 862 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 OR2B3O76000 313 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 BDH1Q02338 343 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 SLC10A7Q0GE19 358 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 ABHD17BQ5VST6 288 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 TMPRSS9Q7Z410 1059 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 NATD1Q8N6N6 113 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 PRELID2Q8N945 189 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 PCDHB18PQ96TA0 734 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 CMKLR1Q99788 373 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 GPATCH1Q9BRR8 931 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 MCOLN1Q9GZU1 580 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 MRM3Q9HC36 420 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 XPNPEP1Q9NQW7 623 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 PACSIN3Q9UKS6 424 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 SQORQ9Y6N5 450 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 MAU2Q9Y6X3 613 aa9.71□□□□□ -0.86
CLTCL1-202ENST00000427926 SLIT2O94813 1529 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CHD2O14647 1828 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 IGLV3-22A0A075B6J6 115 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ARPC4-TTLL3A0A0A6YYG9 625 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 NRP2O60462 931 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 P04436 131 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 MPSTP25325 297 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 DNAJA1P31689 397 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 MAGEA11P43364 429 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 GALK2Q01415 458 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 SEMA3AQ14563 771 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF542PQ5EBM4 170 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CRTC1Q6UUV9 634 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ABRAXAS1Q6UWZ7 409 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 DGLUCYQ7Z3D6 616 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CLNKQ7Z7G1 428 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 OR10H4Q8NGA5 316 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 NINJ1Q92982 152 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ART4Q93070 314 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PYCR2Q96C36 320 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CPNE2Q96FN4 548 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ELAC1Q9H777 363 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 SMURF1Q9HCE7 757 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ATXN10Q9UBB4 475 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CER1O95813 267 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 SNAI1O95863 264 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PTX3P26022 381 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 RPS6KA3P51812 740 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 MTTPP55157 894 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 AP1S2P56377 157 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 RCAN2Q14206 197 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF267Q14586 743 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 RALGPS2Q86X27 583 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 OR13C4Q8NGS5 318 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 TFAP2BQ92481 460 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 BORCS8Q96FH0 119 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 FARSBQ9NSD9 589 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 MBD2Q9UBB5 411 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 HAS3O00219 553 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ADAMDEC1O15204 470 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ALOX15BO15296 676 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 RPS14P62263 151 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 EIF4HQ15056 248 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ABCA11PQ4W5N1 156 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CLEC6AQ6EIG7 209 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 THOC7Q6I9Y2 204 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 SLC30A8Q8IWU4 369 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 SNRNP27Q8WVK2 155 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 JPH3Q8WXH2 748 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 NTAN1Q96AB6 310 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 AGAP2Q99490 1192 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PLAGL1Q9UM63 463 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 REXO2Q9Y3B8 237 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PLIN4Q96Q06 1357 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 TTC34A8MYJ7 566 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF879B4DU55 563 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 OR1I1O60431 355 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 UGT2B11O75310 529 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 APBB3O95704 486 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 ACVRL1P37023 503 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 RPS9P46781 194 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CDH12P55289 794 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 PCBP2Q15366 365 aaKnown RBP eCLIP9.7□□□□□ -0.867e-13■■■■■ 53.1
CLTCL1-202ENST00000427926 ZNF805Q5CZA5 627 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 GLYATQ6IB77 296 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 GPAT4Q86UL3 456 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 CROCCP3Q8IVE0 287 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 GPR65Q8IYL9 337 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 NAXEQ8NCW5 288 aa9.7□□□□□ -0.86
CLTCL1-202ENST00000427926 OR4C15Q8NGM1 316 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms