RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TYRP1P17643 537 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 EVI2BP34910 448 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DIO1P49895 249 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TOB1P50616 345 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 DLG4P78352 724 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 LIPEQ05469 1076 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DLX2Q07687 328 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 HYAL2Q12891 473 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 BRAT1Q6PJG6 821 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CCNI2Q6ZMN8 369 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZNF627Q7L945 461 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 NLRC3Q7RTR2 1065 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 KAT2AQ92830 837 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ELMO3Q96BJ8 720 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 KLHL15Q96M94 604 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TDRD1Q9BXT4 1180 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 B3GNT4Q9C0J1 378 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CDH20Q9HBT6 801 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 POLR3BQ9NW08 1133 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 C14orf166Q9Y224 244 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 MYRFQ9Y2G1 1151 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 C15orf41Q9Y2V0 281 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 STK16O75716 305 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SLC22A3O75751 556 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 NR4A1P22736 598 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 EIF1AXP47813 144 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 SRYQ05066 204 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SEC23BQ15437 767 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CLPPQ16740 277 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 TMEM44Q2T9K0 475 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 RNASE12Q5GAN4 147 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 LIPMQ5VYY2 423 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TMEM225Q6GV28 225 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 LCTLQ6UWM7 567 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 CREG2Q8IUH2 290 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 OR4E2Q8NGC2 313 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.6□□□□□ -1.512e-10■■■■■ 28.1
HERC4-206ENST00000427635 PHOSPHO1Q8TCT1 267 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 AUTS2Q8WXX7 1259 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PTCD3Q96EY7 689 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 HMCESQ96FZ2 354 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 APOLD1Q96LR9 279 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ADAD1Q96M93 576 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 TGM7Q96PF1 710 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 RNF157Q96PX1 679 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 C1orf21Q9H246 121 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SUV39H2Q9H5I1 410 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DDX4Q9NQI0 724 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 C14orf105Q9NVL8 296 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZC3H13Q5T200 1668 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 LOC102723532A0A0G2JNH3 316 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 A0A1B0GVI7 797 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 YDJCA8MPS7 323 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TFECO14948 347 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 PROM1O43490 865 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 MPZL2O60487 215 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 IFNA21P01568 189 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PFKLP17858 780 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TNFRSF8P28908 595 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 GCH1P30793 250 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 UGT1A3P35503 534 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ADAM8P78325 824 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ST3GAL1Q11201 340 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 BLMHQ13867 455 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 USP49Q70CQ1 688 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 COMTD1Q86VU5 262 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SLC34A3Q8N130 599 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 GPR137CQ8N3F9 429 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FAM86B1Q8N7N1 296 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ANKRD53Q8N9V6 530 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 DNAJB14Q8TBM8 379 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ZNF296Q8WUU4 475 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 C1orf50Q9BV19 199 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 BCAS3Q9H6U6 928 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PRTFDC1Q9NRG1 225 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 LYARQ9NX58 379 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 SLC22A14Q9Y267 594 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 Q9Y3F1 56 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FKBP7Q9Y680 259 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 OR6C65A6NJZ3 312 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PITPNM1O00562 1244 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 EIF1AYO14602 144 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 HNRNPA1P09651 372 aaKnown RBP eCLIP5.6□□□□□ -1.51
HERC4-206ENST00000427635 GADD45AP24522 165 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 SDC2P34741 201 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 POLR2HP52434 150 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 GBX2P52951 348 aaPredicted RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 DRG2P55039 364 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 IL10RBQ08334 325 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PDK4Q16654 411 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 TRMT5Q32P41 509 aaKnown RBP5.6□□□□□ -1.51
HERC4-206ENST00000427635 TMEM119Q4V9L6 283 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FBXO48Q5FWF7 155 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 PRAMEF13Q5VWM6 474 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 C3P1Q6ZMU1 363 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 C1orf122Q6ZSJ8 110 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 NUDT13Q86X67 352 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms