RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 OOSP2Q86WS3 158 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 TDRPQ86YL5 185 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 LRRC56Q8IYG6 542 aaPredicted RBP7.16□□□□□ -1.26
LINC01049-201ENST00000426840 C2orf73Q8N5S3 287 aaPredicted RBP7.16□□□□□ -1.26
LINC01049-201ENST00000426840 HMGCLL1Q8TB92 370 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 MCOLN3Q8TDD5 553 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 MZB1Q8WU39 189 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 ZNF480Q8WV37 535 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 KCTD4Q8WVF5 259 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 NXNL1Q96CM4 212 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 GRAMD1AQ96CP6 724 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 ZDHHC12Q96GR4 267 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 LIN37Q96GY3 246 aaPredicted RBP7.16□□□□□ -1.26
LINC01049-201ENST00000426840 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 PPM1MQ96MI6 270 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 GPR78Q96P69 363 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 TGM7Q96PF1 710 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 OR2A14Q96R47 310 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 MAP3K3Q99759 626 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 DERL2Q9GZP9 239 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 PARVBQ9HBI1 364 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 SNX15Q9NRS6 342 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 IGSF5Q9NSI5 407 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 EURLQ9NYK6 297 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 ACTR10Q9NZ32 417 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 OR6C2Q9NZP2 312 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 SPATA7Q9P0W8 599 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 POMT2Q9UKY4 750 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 ACOT9Q9Y305 439 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 NEUROG3Q9Y4Z2 214 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 IKBKGQ9Y6K9 419 aa7.16□□□□□ -1.26
LINC01049-201ENST00000426840 CCDC187A0A096LP49 1063 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 A0A096LPK6 155 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 IGHV5-51A0A0C4DH38 117 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 A0A1W2PPM1 405 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PMS2P1A4D2B8 440 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TRABD2BA6NFA1 517 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 C2orf74A8MZ97 194 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 E7ENX8 843 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 LINC01387J3KSC0 135 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 HGSO14964 777 aaPredicted RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TOX3O15405 576 aaPredicted RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 NDUFB5O43674 189 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 KDM1AO60341 852 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 KRT37O76014 449 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SLC16A8O95907 504 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 MPOP05164 745 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 LTA4HP09960 611 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 NUDT17P0C025 328 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 ANKRD34CP0C6C1 535 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CCL4P13236 92 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 UGT2B7P16662 529 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CYP2A7P20853 494 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 MAP4P27816 1152 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 IMPA1P29218 277 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TYK2P29597 1187 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 HSD17B2P37059 387 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 GATA4P43694 442 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PPM1FP49593 454 aaPredicted RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SERPINB8P50452 374 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 ATP6V0D1P61421 351 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 YBX1P67809 324 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 IRF9Q00978 393 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TAP2Q03519 686 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SP140Q13342 867 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 DOC2BQ14184 412 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CSHL1Q14406 222 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 KIR2DS3Q14952 304 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 ARHGAP19Q14CB8 494 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 RTP5Q14D33 572 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TSNQ15631 228 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PPP1R3AQ16821 1122 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SNAP47Q5SQN1 464 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PHF19Q5T6S3 580 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 LGSNQ5TDP6 509 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CACHD1Q5VU97 1274 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 ANKS6Q68DC2 871 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 ARMC6Q6NXE6 501 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 IRGCQ6NXR0 463 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 FAM92BQ6ZTR7 304 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SH2D5Q6ZV89 423 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 RAPH1Q70E73 1250 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PRSS42Q7Z5A4 293 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CCDC91Q7Z6B0 441 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CENPLQ8N0S6 344 aaPredicted RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 IQCKQ8N0W5 287 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PLD6Q8N2A8 252 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 RCBTB1Q8NDN9 531 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 OR2A1Q8NGT9 310 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 OR2W6PQ8NHA6 318 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 KIAA1191Q96A73 305 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PTERQ96BW5 349 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 SLC41A2Q96JW4 573 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CCDC138Q96M89 665 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 CD180Q99467 661 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 PITPNM3Q9BZ71 974 aa7.15□□□□□ -1.26
LINC01049-201ENST00000426840 UNKQ9C0B0 810 aaKnown RBP7.15□□□□□ -1.26
LINC01049-201ENST00000426840 NMRAL1Q9HBL8 299 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms