RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 SEMA4FO95754 770 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 CDH1P12830 882 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 HOXD8P13378 290 aaPredicted RBP13.51□□□□□ -0.25
RPL28-202ENST00000426763 MPP7Q5T2T1 576 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 NIPAL1Q6NVV3 410 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 KLHL25Q9H0H3 589 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 NCDNQ9UBB6 729 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
RPL28-202ENST00000426763 LINC00854A0A1B0GVQ3 168 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 FAM221BA6H8Z2 402 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 SEPHS1P49903 392 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 CLCN4P51793 760 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 DNAJB13P59910 316 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 TRIM25Q14258 630 aaKnown RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 C10orf62Q5T681 223 aaPredicted RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 PIH1D2Q8WWB5 315 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 PTGFRNQ9P2B2 879 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 ZDHHC2Q9UIJ5 367 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 E7ESA3 106 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 COQ9O75208 318 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 ARSAP15289 507 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 IGFBP5P24593 272 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 HRH2P25021 359 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SPINT3P49223 89 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 MTPNP58546 118 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 HDHD2Q9H0R4 259 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 UTS2RQ9UKP6 389 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 RNF11Q9Y3C5 154 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 JUNDP17535 347 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 MLIPQ5VWP3 458 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 CCDC103Q8IW40 242 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SIX5Q8N196 739 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 C10orf82Q8WW14 230 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SCRN2Q96FV2 425 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 MGME1Q9BQP7 344 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SLC17A9Q9BYT1 436 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 TOR4AQ9NXH8 423 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 USP3Q9Y6I4 520 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 CENPXA8MT69 81 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 MGRN1O60291 552 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 S1PR4O95977 384 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 NR2F6P10588 404 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 MGAT3Q09327 533 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 ZNF678Q5SXM1 525 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SLC29A4Q7RTT9 530 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 CHST14Q8NCH0 376 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 APOBEC3BQ9UH17 382 aaKnown RBP13.5□□□□□ -0.25
RPL28-202ENST00000426763 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 GRXCR1A8MXD5 290 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 RAB8AP61006 207 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 TRIQKQ629K1 86 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 KCT2Q8NC54 265 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 STRADBQ9C0K7 418 aa13.5□□□□□ -0.25
RPL28-202ENST00000426763 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 A8MUA0 341 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PDZK1Q5T2W1 519 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 KCNN2Q9H2S1 579 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 OARD1Q9Y530 152 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PAPPAQ13219 1627 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PHIPQ8WWQ0 1821 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PNMA8CA0A1B0GUJ8 204 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 REM1O75628 298 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 TMEM198Q66K66 360 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PSAPL1Q6NUJ1 521 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 ARL10Q8N8L6 244 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PAPOLBQ9NRJ5 636 aaKnown RBP13.49□□□□□ -0.25
RPL28-202ENST00000426763 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
RPL28-202ENST00000426763 WASH4PA8MWX3 477 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 STATHP02808 62 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 CLCN7P51798 805 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 SCARB2Q14108 478 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 FRMD7Q6ZUT3 714 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 OAFQ86UD1 273 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 P2RX2Q9UBL9 471 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 C19orf25Q9UFG5 118 aaPredicted RBP13.49□□□□□ -0.25
RPL28-202ENST00000426763 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 TMEM233B4DJY2 109 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 ADAM12O43184 909 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 CCNB2O95067 398 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms