RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 NSL1Q96IY1 281 aa4.32□□□□□ -1.72
RAB3GAP1-202ENST00000425393 MGME1Q9BQP7 344 aa4.32□□□□□ -1.72
RAB3GAP1-202ENST00000425393 INTS9Q9NV88 658 aaKnown RBP4.32□□□□□ -1.72
RAB3GAP1-202ENST00000425393 POLLQ9UGP5 575 aa4.32□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZNF197O14709 1029 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 AP2A2O94973 939 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CAVIN2O95810 425 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CDH3P22223 829 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CD27P26842 260 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 C20orf194Q5TEA3 1177 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZC2HC1BQ5TFG8 222 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 C15orf39Q6ZRI6 1047 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ADCK2Q7Z695 626 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 EID3Q8N140 333 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 NDUFAF2Q8N183 169 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 MAPK1IP1LQ8NDC0 245 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 OR4K1Q8NGD4 311 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 DYRK2Q92630 601 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TMEM143Q96AN5 459 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ANKRD9Q96BM1 317 aaPredicted RBP4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SIPA1Q96FS4 1042 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SPAG5Q96R06 1193 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 MAP3K3Q99759 626 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 FN3KQ9H479 309 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 PFDN4Q9NQP4 134 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 GSN-AS1Q9NRJ2 163 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 P4HTMQ9NXG6 502 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 GRID1Q9ULK0 1009 aa4.31□□□□□ -1.72
RAB3GAP1-202ENST00000425393 KLF11O14901 512 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CEACAM1P13688 526 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ACAT1P24752 427 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TIA1P31483 386 aaKnown RBP eCLIP4.3□□□□□ -1.722e-8■■■□□ 15.5
RAB3GAP1-202ENST00000425393 SCARB2Q14108 478 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 PTGISQ16647 500 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 UGCGQ16739 394 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 PHKG1Q16816 387 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SLC25A53Q5H9E4 307 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SLC35D3Q5M8T2 416 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ARMC3Q5W041 872 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SH2D5Q6ZV89 423 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ANKRD33Q7Z3H0 272 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 KIRREL3Q8IZU9 778 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZNF248Q8NDW4 579 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 OR4C3Q8NH37 302 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 PROX1Q92786 737 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 FAM162AQ96A26 154 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 THOC1Q96FV9 657 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ERO1AQ96HE7 468 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 URM1Q9BTM9 101 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 KATNB1Q9BVA0 655 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 FAM207AQ9NSI2 230 aaPredicted RBP4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 STK36Q9NRP7 1315 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 A0A1W2PRQ8 180 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 HTR3EA5X5Y0 456 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TSPY2A6NKD2 308 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 GLRA3O75311 464 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TBCAO75347 108 aaKnown RBP4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 DDHD2O94830 711 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 GSRP00390 522 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZFYP08048 801 aaPredicted RBP4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TSPY3P0CV98 308 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TSPY8P0CW00 308 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 HOXC13P31276 330 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 HSD17B3P37058 310 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 MAGEA11P43364 429 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 RBP5P82980 135 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TSPY1Q01534 308 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CDR2Q01850 454 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 GCNT1Q02742 428 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TEAD2Q15562 447 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 LACTB2Q53H82 288 aaPredicted RBP4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 NOTUMQ6P988 496 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZNF790Q6PG37 636 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 PSRC1Q6PGN9 363 aaPredicted RBP4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ENPP7Q6UWV6 458 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SPATA19Q7Z5L4 167 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 DNAJB7Q7Z6W7 309 aaPredicted RBP4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 METTL23Q86XA0 190 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 FAM219AQ8IW50 185 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TIGD4Q8IY51 512 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 LGI2Q8N0V4 545 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 RAD54LQ92698 747 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 MTMR12Q9C0I1 747 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ZMYND12Q9H0C1 365 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 THAP2Q9H0W7 228 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 ATP13A3Q9H7F0 1226 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 LMAN1LQ9HAT1 526 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SH3GLB2Q9NR46 395 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 TXNDC16Q9P2K2 825 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SNX7Q9UNH6 387 aa4.29□□□□□ -1.72
RAB3GAP1-202ENST00000425393 A0A087X002 238 aa4.28□□□□□ -1.72
RAB3GAP1-202ENST00000425393 C5orf52A6NGY3 159 aa4.28□□□□□ -1.72
RAB3GAP1-202ENST00000425393 SLCO1B7G3V0H7 640 aa4.28□□□□□ -1.72
RAB3GAP1-202ENST00000425393 CDK2AP2O75956 126 aa4.28□□□□□ -1.72
RAB3GAP1-202ENST00000425393 KRT33AO76009 404 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms