RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZC3H7BQ9UGR2 993 aaKnown RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 FOXD3Q9UJU5 478 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 CDC14AQ9UNH5 594 aa5.97□□□□□ -1.45
SDCBP-203ENST00000424270 KLF13Q9Y2Y9 288 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-203ENST00000424270 A0A087X1B8 175 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 GLYATL1P3A0A0U1RQE8 302 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HSPB2A8KAH6 182 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 FAM166BA8MTA8 275 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 EEF1E1-BLOC1S5C9J1V9 151 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 QSOX1O00391 747 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 GPR39O43194 453 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 EEF1E1O43324 174 aaKnown RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 GOSR1O95249 250 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 PRLP01236 227 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CREB1P16220 341 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ADH7P40394 386 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 MTIF2P46199 727 aaKnown RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ITGA8P53708 1063 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 GPR85P60893 370 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ACTN3Q08043 901 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CUL4AQ13619 759 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ITGA9Q13797 1035 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HSPB2Q16082 182 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CMPK2Q5EBM0 449 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 WASHC2DQ5SRD0 308 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CCDC122Q5T0U0 273 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 C1orf185Q5T7R7 199 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 WLSQ5T9L3 541 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 LIPNQ5VXI9 398 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HIST2H2BDQ6DRA6 164 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 TMC3Q7Z5M5 1100 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 TAX1BP1Q86VP1 789 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 LILRA3Q8N6C8 439 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 OR52N2Q8NGI0 321 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HM13Q8TCT9 377 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HSPH1Q92598 858 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 TFGQ92734 400 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 EID2BQ96D98 161 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 MMABQ96EY8 250 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 GSDMAQ96QA5 445 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 XPO4Q9C0E2 1151 aaKnown RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CHRNA10Q9GZZ6 450 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CDCP1Q9H5V8 836 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 LDAHQ9H6V9 325 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 MAGEE1Q9HCI5 957 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 SPHK1Q9NYA1 384 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 CWC15Q9P013 229 aaKnown RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 STOX2Q9P2F5 926 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HOOK1Q9UJC3 728 aaKnown RBP5.96□□□□□ -1.46
SDCBP-203ENST00000424270 TMPRSS11EQ9UL52 423 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 PLAGL1Q9UM63 463 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ICKQ9UPZ9 632 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 HPSEQ9Y251 543 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 ASF1AQ9Y294 204 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 DUSP10Q9Y6W6 482 aa5.96□□□□□ -1.46
SDCBP-203ENST00000424270 TLN2Q9Y4G6 2542 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 CD5LO43866 347 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 PEX1O43933 1283 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 MAN1A2O60476 641 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 NEURL1O76050 574 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 GFPT2O94808 682 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ONECUT2O95948 504 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 HRGP04196 525 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 HLA-DQB2P05538 268 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 SOX5P35711 763 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 HCAR3P49019 387 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 PTH2RP49190 550 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF135P52742 658 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 RPL7AP62424 266 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 PPIAP62937 165 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 CDR2Q01850 454 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 TNK1Q13470 666 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 DPYSQ14117 519 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 BECN1Q14457 450 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 KRT81Q14533 505 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 KIR2DS3Q14952 304 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 SF1Q15637 639 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 EXT1Q16394 746 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 MUM1Q2TAK8 710 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 COBLL1Q53SF7 1204 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 EMC4Q5J8M3 183 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ZDHHC20Q5W0Z9 365 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ATL3Q6DD88 541 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 PLAG1Q6DJT9 500 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 CPEB2Q7Z5Q1 589 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF677Q86XU0 584 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 C2orf73Q8N5S3 287 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 TEX26Q8N6G2 289 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 CCNYQ8ND76 341 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 DDHD1Q8NEL9 900 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ROBO4Q8WZ75 1007 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 KIAA1191Q96A73 305 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ZBED6CLQ96FA7 236 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 SRPK1Q96SB4 655 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 ZFYVE21Q9BQ24 234 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 THAP2Q9H0W7 228 aa5.95□□□□□ -1.46
SDCBP-203ENST00000424270 C12orf65Q9H3J6 166 aaKnown RBP5.95□□□□□ -1.46
SDCBP-203ENST00000424270 VPS37BQ9H9H4 285 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms