RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GUCY2DQ02846 1103 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 FASTKQ14296 549 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 TBR1Q16650 682 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 FCRL6Q6DN72 434 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 FAM199XQ6PEV8 388 aaPredicted RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 BORAQ6PGQ7 559 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 SUSD1Q6UWL2 747 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 C3orf62Q6ZUJ4 267 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 CYS1Q717R9 158 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 ZC3HC1Q86WB0 502 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 NKAPQ8N5F7 415 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 ZNF655Q8N720 491 aaPredicted RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 OR2A1Q8NGT9 310 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 PROKR1Q8TCW9 393 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 ZNF480Q8WV37 535 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 EXTL1Q92935 676 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 CPNE1Q99829 537 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 SELENOSQ9BQE4 189 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 LRRC1Q9BTT6 524 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 DPH7Q9BTV6 452 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 PCBD2Q9H0N5 130 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 CHST8Q9H2A9 424 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 RHOJQ9H4E5 214 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 PARVBQ9HBI1 364 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 CCDC177Q9NQR7 707 aaPredicted RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 ANKMY1Q9P2S6 941 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 MTRF1LQ9UGC7 380 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 TAC3Q9UHF0 121 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 GPN3Q9UHW5 284 aaPredicted RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 FARSAQ9Y285 508 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 PSAT1Q9Y617 370 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 MRPS18BQ9Y676 258 aaKnown RBP10.51□□□□□ -0.73
USP49-204ENST00000423567 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
USP49-204ENST00000423567 ITPR1Q14643 2758 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 ZFYVE26Q68DK2 2539 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 CFAP47Q6ZTR5 3102 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 LAMA5O15230 3695 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 A0A1W2PPV9 198 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 TCRBV9S1A1TA0A576 114 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 CDC14CA4D256 554 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 E7ENX8 843 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 SRPX2O60687 465 aaPredicted RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 RECKO95980 971 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 CD63P08962 238 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 RAB40ALP0C0E4 278 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 SFTPCP11686 197 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 F8A1P23610 371 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PTPN4P29074 926 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 RORAP35398 523 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 DCDP81605 110 aaKnown RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 TIAL1Q01085 375 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP49-204ENST00000423567 TAP2Q03519 686 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PRDX1Q06830 199 aaKnown RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 ERV3-1Q14264 604 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 GRM7Q14831 915 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 DEFB109BQ30KR1 87 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PTCHD3Q3KNS1 767 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 GLE1Q53GS7 698 aaKnown RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 YOD1Q5VVQ6 348 aaPredicted RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 ICE2Q659A1 982 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 RHBDD2Q6NTF9 364 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 ADCK2Q7Z695 626 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 SYVN1Q86TM6 617 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 CEP112Q8N8E3 955 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 SLC38A9Q8NBW4 561 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PPFIBP2Q8ND30 876 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 TSPAN17Q96FV3 270 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 BBC3Q96PG8 261 aaPredicted RBP10.5□□□□□ -0.73
USP49-204ENST00000423567 OLFM1Q99784 485 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 NLNQ9BYT8 704 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 FAM129AQ9BZQ8 928 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 ACTL8Q9H568 366 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 NDOR1Q9UHB4 597 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 ADAMTS6Q9UKP5 1117 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 SNX7Q9UNH6 387 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PDE10AQ9Y233 779 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 POLHQ9Y253 713 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 PADI2Q9Y2J8 665 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 KLK4Q9Y5K2 254 aa10.5□□□□□ -0.73
USP49-204ENST00000423567 A0A0J9YVX5 310 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 TERTO14746 1132 aaKnown RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 HCRTR1O43613 425 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 EIF2S1P05198 315 aaKnown RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 ENO2P09104 434 aaPredicted RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 PIM1P11309 404 aaPredicted RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 ZNF37AP17032 561 aaPredicted RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 ALAS2P22557 587 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 CCND1P24385 295 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 HRH2P25021 359 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 IMPA1P29218 277 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 GP5P40197 560 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 AP1S2P56377 157 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 VSX2P58304 361 aaPredicted RBP10.49□□□□□ -0.73
USP49-204ENST00000423567 POU4F1Q01851 419 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 LY6DQ14210 128 aa10.49□□□□□ -0.73
USP49-204ENST00000423567 TRADDQ15628 312 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms