RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PCBP2Q15366 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
DDX55-203ENST00000421670 SNAP47Q5SQN1 464 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 ICE2Q659A1 982 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 WDR74Q6RFH5 385 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 ZCCHC23Q6ZST2 131 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SLCO6A1Q86UG4 719 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 TEX9Q8N6V9 391 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 CCNYL1Q8N7R7 359 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SNX31Q8N9S9 440 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 OR2L3Q8NG85 312 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SLC22A18Q96BI1 424 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 CCDC126Q96EE4 140 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 RAB33BQ9H082 229 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 KLHL25Q9H0H3 589 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 DNAJC11Q9NVH1 559 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 CUEDC1Q9NWM3 386 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 KLHL20Q9Y2M5 609 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 TNPO3Q9Y5L0 923 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 PTPRBP23467 1997 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 RASSF9O75901 435 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 SUPT7LO94864 414 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 FTH1P19P0C7X4 201 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 PVRP15151 417 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 CHN1P15882 459 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 TSPAN8P19075 237 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 EPORP19235 508 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 IMPDH1P20839 514 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 ATP1A2P50993 1020 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 NAGLUP54802 743 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 CDC16Q13042 620 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 ILKQ13418 452 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 GTF2H2Q13888 395 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 PDK4Q16654 411 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 UNC50Q53HI1 259 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 KIAA1614Q5VZ46 1190 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 GTF2H2CQ6P1K8 395 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 LCTLQ6UWM7 567 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 ZNF574Q6ZN55 896 aaPredicted RBP15.14■□□□□ 0.01
DDX55-203ENST00000421670 GOLGA7Q7Z5G4 137 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 PLXDC1Q8IUK5 500 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 NEIL2Q969S2 332 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 L3HYPDHQ96EM0 354 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 ZDHHC12Q96GR4 267 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 MAP3K3Q99759 626 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 SLC6A20Q9NP91 592 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 EPHA6Q9UF33 1036 aa15.14■□□□□ 0.01
DDX55-203ENST00000421670 IGKV1-8A0A0C4DH67 115 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 A0A0J9YY10 115 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 TLCD2A6NGC4 264 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 E7EQ34 232 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 NRP2O60462 931 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 C9P02748 559 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 FGF3P11487 239 aaPredicted RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 CDH1P12830 882 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 CEACAM1P13688 526 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 MAGP20916 626 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 CDH3P22223 829 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 CCR10P46092 362 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 CDH13P55290 713 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 DNAJB13P59910 316 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 INSM1Q01101 510 aaPredicted RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 PRDX1Q06830 199 aaKnown RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 SQSTM1Q13501 440 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 SLC5A12Q1EHB4 618 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 TMEM71Q6P5X7 295 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 DHRS13Q6UX07 377 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 TMPRSS11BQ86T26 416 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 C17orf64Q86WR6 236 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 NUDCD3Q8IVD9 361 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 ZNF483Q8TF39 744 aaPredicted RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 HAUS8Q9BT25 410 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 C1QTNF3Q9BXJ4 246 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 PCBD2Q9H0N5 130 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 SEMA6CQ9H3T2 930 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 ZBTB26Q9HCK0 441 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 MRPS30Q9NP92 439 aaKnown RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 SEMA4BQ9NPR2 832 aaPredicted RBP15.13■□□□□ 0.01
DDX55-203ENST00000421670 DYRK1BQ9Y463 629 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 ANGPTL3Q9Y5C1 460 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 PCDHGA1Q9Y5H4 931 aa15.13■□□□□ 0.01
DDX55-203ENST00000421670 ASPMQ8IZT6 3477 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 IGHV5-51A0A0C4DH38 117 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 A8MU76 341 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 AGRPO00253 132 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 PRAMEF10O60809 474 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 TRIM13O60858 407 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 ST6GAL1P15907 406 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 EPB42P16452 691 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 CMPK1P30085 196 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 PDX1P52945 283 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 CATSPEREQ5SY80 951 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 B3GNT8Q7Z7M8 397 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 DCBLD1Q8N8Z6 715 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 RCBTB1Q8NDN9 531 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 OR4D9Q8NGE8 314 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 PPP4R1Q8TF05 950 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 SLC5A11Q8WWX8 675 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 GATA5Q9BWX5 397 aaPredicted RBP15.12■□□□□ 0.01
DDX55-203ENST00000421670 GSTO2Q9H4Y5 243 aa15.12■□□□□ 0.01
DDX55-203ENST00000421670 KCNE2Q9Y6J6 123 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms