RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 ZYG11AQ6WRX3 759 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 LRRC70Q7Z2Q7 622 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 RAB44Q7Z6P3 723 aaPredicted RBP16.9■□□□□ 0.3
LINC00271-201ENST00000421378 SLC22A9Q8IVM8 553 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 FAM20CQ8IXL6 584 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 KLHDC8AQ8IYD2 350 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 ADAMTS14Q8WXS8 1223 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 CCDC126Q96EE4 140 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 DEPDC7Q96QD5 511 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 OR4K3Q96R72 315 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 MRPS30Q9NP92 439 aaKnown RBP16.9■□□□□ 0.3
LINC00271-201ENST00000421378 OPTCQ9UBM4 332 aa16.9■□□□□ 0.3
LINC00271-201ENST00000421378 IGHV5-51A0A0C4DH38 117 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 TMEM120BA0PK00 339 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 A8MU76 341 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 SIX3O95343 332 aaPredicted RBP16.89■□□□□ 0.3
LINC00271-201ENST00000421378 MT-CO3P00414 261 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 ANKRD34CP0C6C1 535 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 CPA3P15088 417 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 NPPBP16860 134 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 MAGP20916 626 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 CCKBRP32239 447 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 LSSP48449 732 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 INHBCP55103 352 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 ABATP80404 500 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 TRA2AQ13595 282 aaKnown RBP eCLIP16.89■□□□□ 0.3
LINC00271-201ENST00000421378 PCBP2Q15366 365 aaKnown RBP eCLIP16.89■□□□□ 0.3
LINC00271-201ENST00000421378 PDK4Q16654 411 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 KIAA1614Q5VZ46 1190 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 METTL2BQ6P1Q9 378 aaKnown RBP16.89■□□□□ 0.3
LINC00271-201ENST00000421378 RCBTB1Q8NDN9 531 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 DNAJC11Q9NVH1 559 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.3
LINC00271-201ENST00000421378 SNRNP200O75643 2136 aaKnown RBP16.89■□□□□ 0.29
LINC00271-201ENST00000421378 K7EPI3 171 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ZBTB11O95625 1053 aaPredicted RBP16.89■□□□□ 0.29
LINC00271-201ENST00000421378 PVRP15151 417 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ST6GAL1P15907 406 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 EEF1DP29692 281 aaKnown RBP16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ETV4P43268 484 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 HERVK_113P63132 956 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 YBX1P67809 324 aaKnown RBP16.89■□□□□ 0.29
LINC00271-201ENST00000421378 CDC16Q13042 620 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 NAA25Q14CX7 972 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 PCLAFQ15004 111 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ISXQ2M1V0 245 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 HSP90B2PQ58FF3 399 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ARHGAP22Q7Z5H3 698 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 C17orf64Q86WR6 236 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 TMPRSS12Q86WS5 348 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ERVK-6Q9BXR3 956 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 KLHL25Q9H0H3 589 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 ZNF768Q9H5H4 540 aaKnown RBP16.89■□□□□ 0.29
LINC00271-201ENST00000421378 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 DYRK1BQ9Y463 629 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 PCM1Q15154 2024 aa16.89■□□□□ 0.29
LINC00271-201ENST00000421378 LRRC14BA6NHZ5 514 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SLC9B1P1A6NJY1 282 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 E2F3O00716 465 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 CSO75390 466 aaKnown RBP16.88■□□□□ 0.29
LINC00271-201ENST00000421378 HPDP32754 393 aaPredicted RBP16.88■□□□□ 0.29
LINC00271-201ENST00000421378 ID4P47928 161 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SEPHS1P49903 392 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 PRKAA2P54646 552 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 MPP2Q14168 576 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 KMT5CQ86Y97 462 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 DCBLD1Q8N8Z6 715 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 C19orf47Q8N9M1 422 aaKnown RBP16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SNX31Q8N9S9 440 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SLC5A11Q8WWX8 675 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 NEIL2Q969S2 332 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 TRAPPC9Q96Q05 1148 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SELENOSQ9BQE4 189 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 DPH7Q9BTV6 452 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 STRADBQ9C0K7 418 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SLC6A20Q9NP91 592 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 OXSMQ9NWU1 459 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SOHLH2Q9NX45 425 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 SH2B3Q9UQQ2 575 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 KLHL20Q9Y2M5 609 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 ANGPTL3Q9Y5C1 460 aa16.88■□□□□ 0.29
LINC00271-201ENST00000421378 IGKV1-8A0A0C4DH67 115 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 TMX2-CTNND1H3BSU7 103 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 HGSO14964 777 aaPredicted RBP16.87■□□□□ 0.29
LINC00271-201ENST00000421378 MAP3K7O43318 606 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 RPS17P08708 135 aaKnown RBP16.87■□□□□ 0.29
LINC00271-201ENST00000421378 JUPP14923 745 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 EPB42P16452 691 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 GNAZP19086 355 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 GRIA3P42263 894 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 PIK3CGP48736 1102 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 ARL4DP49703 201 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 SLC18A1P54219 525 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 HSD11B2P80365 405 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 C10orf107Q8IVU9 208 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 GALNT15Q8N3T1 639 aa16.87■□□□□ 0.29
LINC00271-201ENST00000421378 TEX9Q8N6V9 391 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms