RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MCM3P25205 808 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 FOLR3P41439 243 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 RGS4P49798 205 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 CCL11P51671 97 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 ARL4CP56559 192 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 VSX2P58304 361 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TIAL1Q01085 375 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TAP2Q03519 686 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 PRDX1Q06830 199 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 CHAF1BQ13112 559 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TSTA3Q13630 321 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 HIF1AQ16665 826 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 FAM214AQ32MH5 1076 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 WASHC2DQ5SRD0 308 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 HP1BP3Q5SSJ5 553 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TEDDM1Q5T9Z0 273 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 FRMPD2BQ6IN97 320 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 FBXO42Q6P3S6 717 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 ASB18Q6ZVZ8 466 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 UBE2R2Q712K3 238 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 MED25Q71SY5 747 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TMEM102Q8N9M5 508 aaPredicted RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 OR2Y1Q8NGV0 311 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 PTERQ96BW5 349 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 CFAP36Q96G28 342 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 IP6K3Q96PC2 410 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 KRT12Q99456 494 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 TRIM31Q9BZY9 425 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 SLC6A20Q9NP91 592 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 MRPS30Q9NP92 439 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 PPANQ9NQ55 473 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 SLC22A11Q9NSA0 550 aa15.77■□□□□ 0.12
LINC00404-201ENST00000418660 PCDHGA9Q9Y5G4 932 aaKnown RBP15.77■□□□□ 0.12
LINC00404-201ENST00000418660 HELZ2Q9BYK8 2649 aaKnown RBP15.77■□□□□ 0.11
LINC00404-201ENST00000418660 EFCAB8A8MWE9 144 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 PYCARD-AS1I3L0S3 204 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 NDC80O14777 642 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 TP73O15350 636 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 NRP2O60462 931 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 CNOT3O75175 753 aaKnown RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 WISP1O95388 367 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 ALBP02768 609 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 ATXN8OSP0DMR3 200 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 ITGAXP20702 1163 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 OTX2P32243 289 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 CASRP41180 1078 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 RRADP55042 308 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 KLRB1Q12918 225 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 FRG1Q14331 258 aaKnown RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 SLC9A5Q14940 896 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 RBM20Q5T481 1227 aaKnown RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 ICE2Q659A1 982 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 STEAP4Q687X5 459 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 PAQR3Q6TCH7 311 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 OVCH1Q7RTY7 1134 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 LRRC56Q8IYG6 542 aaPredicted RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 PPFIBP2Q8ND30 876 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 EEF1AKMT1Q8WVE0 214 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 FKBP10Q96AY3 582 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 ZFYVE21Q9BQ24 234 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 PLCD4Q9BRC7 762 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 WDR83Q9BRX9 315 aaKnown RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 SLC25A23Q9BV35 468 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 MLXIPLQ9NP71 852 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 UTP6Q9NYH9 597 aaKnown RBP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 TAC3Q9UHF0 121 aa15.76■□□□□ 0.11
LINC00404-201ENST00000418660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00404-201ENST00000418660 LOC105369274A0A096LPK9 316 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 IGKV1-8A0A0C4DH67 115 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 LOC102723532A0A0G2JNH3 316 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 HYKKA2RU49 373 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 CEACAM4O75871 244 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 C8GP07360 202 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
LINC00404-201ENST00000418660 CDKN2DP55273 166 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 ABATP80404 500 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 RELAQ04206 551 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 TLE1Q04724 770 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 CBLBQ13191 982 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 ATP1A4Q13733 1029 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 ZNF425Q6IV72 752 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
LINC00404-201ENST00000418660 PAQR7Q86WK9 346 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 PALM2Q8IXS6 379 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 OR4N4Q8N0Y3 316 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 TEX19Q8NA77 164 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 MCOLN3Q8TDD5 553 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 TRIM4Q9C037 500 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 SLC17A6Q9P2U8 582 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 CORO1CQ9ULV4 474 aaPredicted RBP15.75■□□□□ 0.11
LINC00404-201ENST00000418660 SNX24Q9Y343 169 aa15.75■□□□□ 0.11
LINC00404-201ENST00000418660 E7ESA3 106 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 PEX12O00623 359 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 SLC16A5O15375 505 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 IGHEP01854 428 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 PDGFAP04085 211 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 EIF2S1P05198 315 aaKnown RBP15.74■□□□□ 0.11
LINC00404-201ENST00000418660 IMPA1P29218 277 aa15.74■□□□□ 0.11
LINC00404-201ENST00000418660 CSRP3P50461 194 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms