RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 H3BNX3 289 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 INPP4BO15327 924 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ZW10O43264 779 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 EDIL3O43854 480 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX3O60493 162 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RNASEH1O60930 286 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 GMNNO75496 209 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 DNAJB5O75953 348 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SERPINC1P01008 464 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CYP1A1P04798 512 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 INHBBP09529 407 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3HP0C7X1 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CXCL8P10145 99 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT13P13646 458 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 P4HA1P13674 534 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 JUNBP17275 347 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ITGAXP20702 1163 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 MAT2AP31153 395 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 EVI2BP34910 448 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT20P35900 424 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 PRCPP42785 496 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 MAGEA11P43364 429 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 HTR3AP46098 478 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RABIFP47224 123 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 AP2S1P53680 142 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 POLR2GP62487 172 aaKnown RBP eCLIP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 KCNJ2P63252 427 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 PPP2R2BQ00005 443 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SCRN3Q0VDG4 424 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CST6Q15828 149 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CCDC58Q4VC31 144 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SETMARQ53H47 684 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF542PQ5EBM4 170 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF569Q5MCW4 686 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3GQ6DHY5 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 OR7E24Q6IFN5 339 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3CQ6IPX1 549 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TRMT10BQ6PF06 316 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LRRC74BQ6ZQY2 392 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LINC00299Q6ZSB3 139 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CYP4V2Q6ZWL3 525 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LARP4Q71RC2 724 aaKnown RBP eCLIP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RHOUQ7L0Q8 258 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 HDDC2Q7Z4H3 204 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 GPR141Q7Z602 305 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CEP97Q8IW35 865 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 UNC5BQ8IZJ1 945 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D3Q8IZP1 549 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RIBC1Q8N443 379 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 FANCBQ8NB91 859 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NLGN4YQ8NFZ3 816 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TTLQ8NG68 377 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NCOA7Q8NI08 942 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LHFPL5Q8TAF8 219 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC22A8Q8TCC7 542 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX33Q8WV41 574 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RAPGEF5Q92565 580 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RAB24Q969Q5 203 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RGMAQ96B86 450 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TLCD1Q96CP7 247 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 PIWIL1Q96J94 861 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TBATAQ96M53 351 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 PRICKLE1Q96MT3 831 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 BTBD9Q96Q07 612 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 MNTQ99583 582 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 ELAC2Q9BQ52 826 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC25A23Q9BV35 468 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 DDA1Q9BW61 102 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 C6orf62Q9GZU0 229 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CLPBQ9H078 707 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX25Q9H3E2 840 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 DENND2DQ9H6A0 471 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NEK6Q9HC98 313 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SYTL2Q9HCH5 934 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 WASH6PQ9NQA3 447 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SDHAF3Q9NRP4 125 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 SELENONQ9NZV5 590 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 CYTH4Q9UIA0 394 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 LSM7Q9UK45 103 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 RCOR1Q9UKL0 485 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 PLA2G4CQ9UP65 541 aa5.37□□□□□ -1.55
ECHDC1-206ENST00000417628 TRAV6A0A075B6T7 132 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 STX16-NPEPL1H3BU86 382 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 KPNA5O15131 536 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 ACOX3O15254 700 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 CLOCKO15516 846 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 MSI1O43347 362 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 SPRY1O43609 319 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 KLHL41O60662 606 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 PRAMEF4O60810 478 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 CYP7B1O75881 506 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 SNAPINO95295 136 aa5.36□□□□□ -1.55
ECHDC1-206ENST00000417628 LYPLA2O95372 231 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms