RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KLK3P07288 261 aaPredicted RBP17.3■□□□□ 0.36
VCP-202ENST00000417448 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
VCP-202ENST00000417448 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.361e-8■■■■■ 39.8
VCP-202ENST00000417448 ITGA3P26006 1051 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 AOAHP28039 575 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 PRKG2Q13237 762 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 TEDDM1Q5T9Z0 273 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 KMT5CQ86Y97 462 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 CFAP61Q8NHU2 1237 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 LRRC39Q96DD0 335 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 NDNQ99608 321 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 FAM167BQ9BTA0 163 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 RUVBL2Q9Y230 463 aaKnown RBP17.3■□□□□ 0.36
VCP-202ENST00000417448 CDYLQ9Y232 598 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 CSAG2Q9Y5P2 127 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 PSAT1Q9Y617 370 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 NUP210LQ5VU65 1888 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 CNTRLQ7Z7A1 2325 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 TLCD2A6NGC4 264 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 MASP2O00187 686 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 AHSGP02765 367 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 CHRM3P20309 590 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 MAGEA4P43358 317 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 ARL4DP49703 201 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 GPX6P59796 221 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 CAV1Q03135 178 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 KRT33BQ14525 404 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 MYBPC3Q14896 1274 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 RBM20Q5T481 1227 aaKnown RBP17.29■□□□□ 0.36
VCP-202ENST00000417448 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 C2CD4AQ8NCU7 369 aaPredicted RBP17.29■□□□□ 0.36
VCP-202ENST00000417448 OR5AR1Q8NGP9 310 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 PPM1MQ96MI6 270 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 AGPAT4Q9NRZ5 378 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
VCP-202ENST00000417448 INTS10Q9NVR2 710 aaKnown RBP17.29■□□□□ 0.36
VCP-202ENST00000417448 KRT87PA6NCN2 255 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
VCP-202ENST00000417448 QSOX1O00391 747 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 NDC80O14777 642 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 LIN7AO14910 233 aaPredicted RBP17.28■□□□□ 0.36
VCP-202ENST00000417448 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
VCP-202ENST00000417448 FBXO38Q6PIJ6 1188 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 GDF7Q7Z4P5 450 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 MRGPREQ86SM8 312 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 FJX1Q86VR8 437 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 LRRC6Q86X45 466 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 GALNT16Q8N428 558 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 CALML6Q8TD86 181 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 TFGQ92734 400 aaPredicted RBP17.28■□□□□ 0.36
VCP-202ENST00000417448 POM121Q96HA1 1249 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 HGH1Q9BTY7 390 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 XKR8Q9H6D3 395 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 RUBCNLQ9H714 662 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 L2HGDHQ9H9P8 463 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 LATS2Q9NRM7 1088 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 FAM114A2Q9NRY5 505 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 PLAGL1Q9UM63 463 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 MED16Q9Y2X0 877 aa17.28■□□□□ 0.36
VCP-202ENST00000417448 IFRD1O00458 451 aaPredicted RBP17.27■□□□□ 0.36
VCP-202ENST00000417448 PFDN6O15212 129 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 GPC4O75487 556 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 ESR1P03372 595 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 APOA4P06727 396 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 ACADLP28330 430 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 OTX2P32243 289 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 TIAL1Q01085 375 aaKnown RBP eCLIP17.27■□□□□ 0.36
VCP-202ENST00000417448 MGAT5Q09328 741 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 CUL1Q13616 776 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 NCF4Q15080 339 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 PLCL1Q15111 1095 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 TESK1Q15569 626 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 PTCHD3Q3KNS1 767 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
VCP-202ENST00000417448 ACSBG2Q5FVE4 666 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 TEX35Q5T0J7 233 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 ZNF449Q6P9G9 518 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 SYTL1Q8IYJ3 562 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 ACVR1CQ8NER5 493 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 OR4E2Q8NGC2 313 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 OR8K5Q8NH50 307 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 GIMAP7Q8NHV1 300 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 MOCS1Q9NZB8 636 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 COPG2Q9UBF2 871 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.36
VCP-202ENST00000417448 NFS1Q9Y697 457 aa17.27■□□□□ 0.36
VCP-202ENST00000417448 KLHL33A6NCF5 533 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 OR5K3A6NET4 321 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 E5RI56 91 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 EIF3HO15372 352 aaKnown RBP eCLIP17.26■□□□□ 0.35
VCP-202ENST00000417448 KLF7O75840 302 aaPredicted RBP17.26■□□□□ 0.35
VCP-202ENST00000417448 ALPPP05187 535 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 TPBGLP0DKB5 382 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 ECHS1P30084 290 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CLCN7P51798 805 aa17.26■□□□□ 0.35
VCP-202ENST00000417448 CDKN2DP55273 166 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms