RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 EGFL8Q99944 293 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 DHRS4Q9BTZ2 278 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 PARD6BQ9BYG5 372 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 ULBP3Q9BZM4 244 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 EPB41L4BQ9H329 900 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 PPCSQ9HAB8 311 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 FAM60AQ9NP50 221 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 SNX7Q9UNH6 387 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 PLCL2Q9UPR0 1127 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 KLHL20Q9Y2M5 609 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 STK17BO94768 372 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 ALDOAP04075 364 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 ITGA1P56199 1179 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 TBPL1P62380 186 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 CDKL4Q5MAI5 379 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 PRAMEF13Q5VWM6 474 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 KLC3Q6P597 504 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 ALKBH8Q96BT7 664 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 NAF1Q96HR8 494 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 HAUS8Q9BT25 410 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 DPH7Q9BTV6 452 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 UNKQ9C0B0 810 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 RALYQ9UKM9 306 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 RNF112Q9ULX5 631 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 TMEM184BQ9Y519 407 aaPredicted RBP22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 AKAP13Q12802 2813 aa22.2■■□□□ 1.14
SMARCB1-205ENST00000417137 IQANK1A0A1B0GTG1 560 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 TRIM49D1C9J1S8 452 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 MT-ND3P03897 115 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 ATP1A2P50993 1020 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 TGFBIQ15582 683 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 FCRL6Q6DN72 434 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 PWWP2BQ6NUJ5 590 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 TMEM126BQ8IUX1 230 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 MCATQ8IVS2 390 aaKnown RBP22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 TCAIMQ8N3R3 496 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 OR56A3Q8NH54 315 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 ISL2Q96A47 359 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 NXNL1Q96CM4 212 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 SGPP1Q9BX95 441 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 SPRY4Q9C004 299 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 VPS11Q9H270 941 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 PSMC3IPQ9P2W1 217 aaPredicted RBP22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 PILRAQ9UKJ1 303 aa22.19■■□□□ 1.14
SMARCB1-205ENST00000417137 A0A087WV48 116 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 E7EQ34 232 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 SCRG1O75711 98 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 KIAA0754O94854 1291 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 KLHL2O95198 593 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 S100BP04271 92 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 TFEBP19484 476 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 CSRP3P50461 194 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 MAP7Q14244 749 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 ACAP2Q15057 778 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 LCTLQ6UWM7 567 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 ISCA2Q86U28 154 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 C17orf64Q86WR6 236 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 DTX1Q86Y01 620 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 NLGN4XQ8N0W4 816 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 NLGN4YQ8NFZ3 816 aaPredicted RBP22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 OR1L3Q8NH93 324 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 AENQ8WTP8 325 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 CABS1Q96KC9 395 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 PLCD4Q9BRC7 762 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 SLC7A5P2Q9GIP4 190 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 IGSF5Q9NSI5 407 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 EURLQ9NYK6 297 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 AP1M2Q9Y6Q5 423 aa22.18■■□□□ 1.14
SMARCB1-205ENST00000417137 SRRM3A6NNA2 597 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 KLK10O43240 276 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 SRPX2O60687 465 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 OR2B3O76000 313 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 HBQ1P09105 142 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 COL6A2P12110 1019 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 GCAP28676 217 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 GABRA4P48169 554 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 RELAQ04206 551 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 DLG1Q12959 904 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 OR4D1Q15615 310 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 BROXQ5VW32 411 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 SULT1C3Q6IMI6 304 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 C6orf15Q6UXA7 325 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 TIFABQ6ZNK6 161 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 ESX1Q8N693 406 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 RHEBL1Q8TAI7 183 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 KCTD4Q8WVF5 259 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 PTERQ96BW5 349 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 TSNARE1Q96NA8 513 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 ALG9Q9H6U8 611 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 CNOT10Q9H9A5 744 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 SLC6A20Q9NP91 592 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 TMEM184CQ9NVA4 438 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 WDR70Q9NW82 654 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 IRAK4Q9NWZ3 460 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 CD274Q9NZQ7 290 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 PCDHB3Q9Y5E6 796 aa22.17■■□□□ 1.14
SMARCB1-205ENST00000417137 OR2A25A4D2G3 310 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 NCF1BA6NI72 391 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 SYCE1LA8MT33 242 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 NCF1CA8MVU1 366 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms