RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CDC16Q13042 620 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 ZNF169Q14929 603 aaPredicted RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 TLR1Q15399 786 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 RNF187Q5TA31 235 aaPredicted RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 B3GNTL1Q67FW5 361 aaPredicted RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 ZNF787Q6DD87 383 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 ISLR2Q6UXK2 745 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 GSTA5Q7RTV2 222 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 KCNMB4Q86W47 210 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 PRSS58Q8IYP2 241 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 OR4N4Q8N0Y3 316 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 GRHL3Q8TE85 626 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 MFSD3Q96ES6 412 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 BIRC8Q96P09 236 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 ZFYVE21Q9BQ24 234 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 DPH7Q9BTV6 452 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 ACAT2Q9BWD1 397 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 DOPEY1Q5JWR5 2465 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 OR2A25A4D2G3 310 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 H3BMM5 538 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 SNRNP200O75643 2136 aaKnown RBP13.77□□□□□ -0.21
PAF1-202ENST00000416728 HPP00738 406 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 ESR1P03372 595 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 ZGLP1P0C6A0 271 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
PAF1-202ENST00000416728 MGAT1P26572 445 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 ARNTP27540 789 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 ATP5DP30049 168 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 CDC25BP30305 580 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 DCTP40126 519 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 Q0VFX4 171 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 FASTKQ14296 549 aaKnown RBP13.77□□□□□ -0.21
PAF1-202ENST00000416728 TYSND1Q2T9J0 566 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 MEI1Q5TIA1 1274 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 CES3Q6UWW8 571 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 LINC00696Q6ZRV3 163 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 LPGAT1Q92604 370 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 FAM136AQ96C01 138 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 CABS1Q96KC9 395 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 MESP1Q9BRJ9 268 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 SYBUQ9NX95 663 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 C3orf18Q9UK00 162 aa13.77□□□□□ -0.21
PAF1-202ENST00000416728 DRG1Q9Y295 367 aaKnown RBP13.77□□□□□ -0.21
PAF1-202ENST00000416728 UTP20O75691 2785 aaKnown RBP13.77□□□□□ -0.21
PAF1-202ENST00000416728 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 GOLGA8KD6RF30 607 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 PRPF4O43172 522 aaKnown RBP eCLIP13.76□□□□□ -0.21
PAF1-202ENST00000416728 PHF2O75151 1096 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 VPS26AO75436 327 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 MATN4O95460 622 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 CHRM3P20309 590 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 YBX1P67809 324 aaKnown RBP13.76□□□□□ -0.21
PAF1-202ENST00000416728 CDK16Q00536 496 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 MFAP5Q13361 173 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 GBX1Q14549 363 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 OR9A1PQ8NGU1 263 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 MAIP1Q8WWC4 291 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 C10orf90Q96M02 699 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 TCF12Q99081 682 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 MRPS30Q9NP92 439 aaKnown RBP13.76□□□□□ -0.21
PAF1-202ENST00000416728 FAM114A2Q9NRY5 505 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
PAF1-202ENST00000416728 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 CRYL1Q9Y2S2 319 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 TEX15Q9BXT5 2789 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 PCM1Q15154 2024 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
PAF1-202ENST00000416728 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 NSG1A0A0A6YYJ2 146 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 E5RI56 91 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 H0YGG7 62 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 E2F3O00716 465 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 USP1O94782 785 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 FGGP02679 453 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 ERGP11308 486 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 EDN3P14138 238 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 TPSB2P20231 275 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
PAF1-202ENST00000416728 EMP3P54852 163 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 ADARP55265 1226 aaKnown RBP13.75□□□□□ -0.21
PAF1-202ENST00000416728 PER3P56645 1201 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 ARF3P61204 181 aaPredicted RBP13.75□□□□□ -0.21
PAF1-202ENST00000416728 TSTA3Q13630 321 aaPredicted RBP13.75□□□□□ -0.21
PAF1-202ENST00000416728 TPSAB1Q15661 275 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 PRTGQ2VWP7 1150 aa13.75□□□□□ -0.21
PAF1-202ENST00000416728 VWA2Q5GFL6 755 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms