RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 VPS29Q9UBQ0 182 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 SLC22A14Q9Y267 594 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 MAN2B2Q9Y2E5 1009 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 DYRK1BQ9Y463 629 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
SSR4P1-201ENST00000415143 TCRBV5S2A0A599 114 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 ELOVL7A1L3X0 281 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 TSPAN6O43657 245 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 MTX2O75431 263 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 RPN2P04844 631 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 GGT1P19440 569 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 ITPKAP23677 461 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 PFN3P60673 137 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 LIN52Q52LA3 116 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 LRIF1Q5T3J3 769 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 ERN2Q76MJ5 926 aaKnown RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 NAT14Q8WUY8 206 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 NELL1Q92832 810 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 LINC00615Q96LM1 132 aaPredicted RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 HBEGFQ99075 208 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 TSC22D3Q99576 134 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 CIB1Q99828 191 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 HDAC8Q9BY41 377 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 EPB41L1Q9H4G0 881 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 INTS7Q9NVH2 962 aaKnown RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 EP300Q09472 2414 aaPredicted RBP13.09□□□□□ -0.31
SSR4P1-201ENST00000415143 ACACBO00763 2458 aa13.08□□□□□ -0.31
SSR4P1-201ENST00000415143 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 FAM220BPB1ANY3 271 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NPC1O15118 1278 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 SGTAO43765 313 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RECQL5O94762 991 aaPredicted RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RASAL1O95294 804 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 CLPTM1O96005 669 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 PDGFBP01127 241 aaPredicted RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ADRB3P13945 408 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 AMD1P17707 334 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 IL1RNP18510 177 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 EPORP19235 508 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 PPIBP23284 216 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RPL3P39023 403 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 EIF2DP41214 584 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 VIPR2P41587 438 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 C21orf58P58505 322 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ACSM2AQ08AH3 577 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 HYAL1Q12794 435 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 EPS8Q12929 822 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RPA4Q13156 261 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NAE1Q13564 534 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 PTGR1Q14914 329 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NRF1Q16656 503 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 SPIN4Q56A73 249 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 SPANXN4Q5MJ08 99 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ANXA8L1Q5VT79 327 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ACSM2BQ68CK6 577 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 HMBOX1Q6NT76 420 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NOXRED1Q6NXP6 359 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NEK5Q6P3R8 708 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 UNC5DQ6UXZ4 953 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 SPRED1Q7Z699 444 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 RBM23Q86U06 439 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 VRK3Q8IV63 474 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 VN1R2Q8NFZ6 395 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 OR56A3Q8NH54 315 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 FAM120BQ96EK7 910 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 FCRL1Q96LA6 429 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 TMEM74Q96NL1 305 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ATG10Q9H0Y0 220 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 FAM120CQ9NX05 1096 aaKnown RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 STOX2Q9P2F5 926 aaPredicted RBP13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 CORO2BQ9UQ03 480 aa13.08□□□□□ -0.32
SSR4P1-201ENST00000415143 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
SSR4P1-201ENST00000415143 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
SSR4P1-201ENST00000415143 AREL1O15033 823 aa13.07□□□□□ -0.32
SSR4P1-201ENST00000415143 CLOCKO15516 846 aa13.07□□□□□ -0.32
SSR4P1-201ENST00000415143 LINC01565O15544 149 aa13.07□□□□□ -0.32
SSR4P1-201ENST00000415143 DDX5P17844 614 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms