RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ATP13A5Q4VNC0 1218 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 LRRC73Q5JTD7 316 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 RASGRP3Q8IV61 690 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 RBFAQ8N0V3 343 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 NXPE1Q8N323 547 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 LMLNQ96KR4 655 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 ACOT13Q9NPJ3 140 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 GPATCH2Q9NW75 528 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 WARS2Q9UGM6 360 aaKnown RBP9.58□□□□□ -0.88
SS18-203ENST00000415083 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 TMEM247A6NEH6 219 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 STK16O75716 305 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 ANGPTL1O95841 491 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
SS18-203ENST00000415083 C1SP09871 688 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 ACPPP15309 386 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 IGFBP5P24593 272 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 FCGRTP55899 365 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
SS18-203ENST00000415083 PLD1Q13393 1074 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 DNASE1L3Q13609 305 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 CLCA4Q14CN2 919 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 MAD2L1BPQ15013 274 aaPredicted RBP9.58□□□□□ -0.88
SS18-203ENST00000415083 CERS6Q6ZMG9 384 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 ZNF555Q8NEP9 628 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 DNASE1L2Q92874 299 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 TESCQ96BS2 214 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 SPC25Q9HBM1 224 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 QPCTLQ9NXS2 382 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 MTCL1Q9Y4B5 1905 aaKnown RBP9.58□□□□□ -0.88
SS18-203ENST00000415083 PCM1Q15154 2024 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 MICAL3Q7RTP6 2002 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 KLHL18O94889 574 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CLDN9O95484 217 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 ZNF7P17097 686 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 SLC19A1P41440 591 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 STK19P49842 368 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 PFN3P60673 137 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 IL5RAQ01344 420 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 ARHGEF7Q14155 803 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 FAHD1Q6P587 224 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 NCCRP1Q6ZVX7 275 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 ADHFE1Q8IWW8 467 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 ENTHD1Q8IYW4 607 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 OR6Q1Q8NGQ2 317 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 NCLNQ969V3 563 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 TAMM41Q96BW9 452 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 RIBC2Q9H4K1 309 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 RNF167Q9H6Y7 350 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 FBXO8Q9NRD0 319 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 RBMX2Q9Y388 322 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 ZNF451Q9Y4E5 1061 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CCDC88CQ9P219 2028 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 GLYATL1P3A0A0U1RQE8 302 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 OR2A25A4D2G3 310 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 TMEM202A6NGA9 273 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 ERN1O75460 977 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 ABLIM3O94929 683 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 EPB42P16452 691 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 DGKAP23743 735 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CD70P32970 193 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 LIPAP38571 399 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 PRSS53Q2L4Q9 553 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 PGS1Q32NB8 556 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 SOWAHCQ53LP3 525 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 TPGS1Q6ZTW0 290 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CCDC103Q8IW40 242 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 EID3Q8N140 333 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 TMCO5AQ8N6Q1 288 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 MYLIPQ8WY64 445 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CEP295NLQ96MC4 621 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 OSGIN1Q9UJX0 560 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 IGLV3-16A0A075B6K0 115 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CLDN25C9JDP6 229 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 NPIPB8E9PQR5 432 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 GNGT2O14610 69 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 HALP42357 657 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 KCNJ10P78508 379 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 BOP1Q14137 746 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 CCSMST1Q4G0I0 132 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 ZNF362Q5T0B9 420 aaPredicted RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 LHX8Q68G74 356 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 OR2T5Q6IEZ7 315 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 CPA6Q8N4T0 437 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 L3MBTL4Q8NA19 623 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 OR2T29Q8NH02 315 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 VWCEQ96DN2 955 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 FAM120BQ96EK7 910 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 HERC2P3Q9BVR0 1158 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 REXO4Q9GZR2 422 aaKnown RBP9.57□□□□□ -0.88
SS18-203ENST00000415083 CCDC90BQ9GZT6 254 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 SLC32A1Q9H598 525 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 C3orf18Q9UK00 162 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 PCDHGA6Q9Y5G7 932 aa9.57□□□□□ -0.88
SS18-203ENST00000415083 KIAA1549LQ6ZVL6 1849 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms