RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TRPC4APQ8TEL6 797 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 CCDC138Q96M89 665 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 CD244Q9BZW8 370 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 KCNK13Q9HB14 408 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 INTS7Q9NVH2 962 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 PCDHGA2Q9Y5H1 932 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 R4GN57 208 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PABPN1LA6NDY0 278 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 TMEM114B3SHH9 223 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 TMEM233B4DJY2 109 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 FCHO1O14526 889 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 HNRNPRO43390 633 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 NPHS1O60500 1241 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 H2AFYO75367 372 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 MTHFD1P11586 935 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 GGT5P36269 586 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SLC19A1P41440 591 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 HALP42357 657 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SLC6A12P48065 614 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 ACTR3P61158 418 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SH3BP2P78314 561 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 CLCQ05315 142 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 ASPHQ12797 758 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 TEAD4Q15561 434 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 WASH2PQ6VEQ5 465 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SCUBE1Q8IWY4 988 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 TBC1D21Q8IYX1 336 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 ZNF548Q8NEK5 533 aaPredicted RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 FAM46DQ8NEK8 389 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 OR52B6Q8NGF0 335 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PPP4R1Q8TF05 950 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 JPH3Q8WXH2 748 aaPredicted RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 RAD51AP1Q96B01 352 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PPP1R14BQ96C90 147 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 FBXL8Q96CD0 374 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 MPP4Q96JB8 637 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 CNDP1Q96KN2 507 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 C7orf26Q96N11 449 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 TRIT1Q9H3H1 467 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 WASH6PQ9NQA3 447 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PNPOQ9NVS9 261 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 ZDHHC2Q9UIJ5 367 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 ZNF225Q9UK10 706 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SLC22A14Q9Y267 594 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PRR33A8MZF0 331 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 FKBP6O75344 327 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 STK16O75716 305 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 HNMTP50135 292 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 BNIP3Q12983 259 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 NAE1Q13564 534 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 CDKL4Q5MAI5 379 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 PEAR1Q5VY43 1037 aaPredicted RBP15.03■□□□□ -0
SHMT2-202ENST00000414700 IYDQ6PHW0 289 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 SUSD1Q6UWL2 747 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 GOLGA7Q7Z5G4 137 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 PDSS2Q86YH6 399 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 SYTL1Q8IYJ3 562 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 UBTD2Q8WUN7 234 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 MED8Q96G25 268 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 CDK15Q96Q40 435 aa15.03■□□□□ -0
SHMT2-202ENST00000414700 YY2O15391 372 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 WDR47O94967 919 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 CFIP05156 583 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 EPORP19235 508 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 HNRNPKP61978 463 aaKnown RBP eCLIP15.02■□□□□ -0
SHMT2-202ENST00000414700 HPCAP84074 193 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 GTF2H2Q13888 395 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 DNAL1Q4LDG9 190 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 GTF2H2CQ6P1K8 395 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 LRRC56Q8IYG6 542 aaPredicted RBP15.02■□□□□ -0
SHMT2-202ENST00000414700 CAMK1GQ96NX5 476 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 OR4K3Q96R72 315 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 SMOC1Q9H4F8 434 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 XKR8Q9H6D3 395 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 NOL11Q9H8H0 719 aaKnown RBP15.02■□□□□ -0
SHMT2-202ENST00000414700 OPTCQ9UBM4 332 aa15.02■□□□□ -0
SHMT2-202ENST00000414700 TNPO3Q9Y5L0 923 aaKnown RBP15.02■□□□□ -0
SHMT2-202ENST00000414700 PRR5-ARHGAP8B1AHC4 643 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 B2RBV5 119 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 B4DGG1 531 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 E7ENX8 843 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 K7EPI3 171 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 OR7A17O14581 309 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 AQP9O43315 295 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 PIAS2O75928 621 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 BAG2O95816 211 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 FOXA1P55317 472 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 TBPL1P62380 186 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 TAP2Q03519 686 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 MED21Q13503 144 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 TSTA3Q13630 321 aaPredicted RBP15.02□□□□□ -0.01
SHMT2-202ENST00000414700 KRT33BQ14525 404 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 SHBQ15464 509 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.02□□□□□ -0.01
SHMT2-202ENST00000414700 AAGABQ6PD74 315 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 CUZD1Q86UP6 607 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 LINC01555Q8NAE3 123 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 OR52E1Q8NGJ3 308 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 SLC37A2Q8TED4 501 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms