RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 NKAPQ8N5F7 415 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 FBF1Q8TES7 1133 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 EXTL1Q92935 676 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 PDLIM5Q96HC4 596 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 MCMBPQ9BTE3 642 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 GPR87Q9BY21 358 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 TRIM54Q9BYV2 358 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 STOX2Q9P2F5 926 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 PCDHGA6Q9Y5G7 932 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 CACNA1GO43497 2377 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 CTSVO60911 334 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 ZNF37AP17032 561 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 AGXTP21549 392 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 STX2P32856 288 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 GP5P40197 560 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 POU4F1Q01851 419 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 ZNF460Q14592 562 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 PHKG1Q16816 387 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 PTCHD3Q3KNS1 767 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 LCN10Q6JVE6 187 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 MBOAT1Q6ZNC8 495 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 CEP97Q8IW35 865 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 LRRC56Q8IYG6 542 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 LSM14AQ8ND56 463 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 WBP1Q96G27 269 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 RUFY1Q96T51 708 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 SELENOSQ9BQE4 189 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 ARHGAP9Q9BRR9 750 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 NDC1Q9BTX1 674 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 SLC6A20Q9NP91 592 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 SRPK3Q9UPE1 567 aa17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 FARSAQ9Y285 508 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-206ENST00000409141 A0A0J9YVX5 310 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 OR2A25A4D2G3 310 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 C1QAP02745 245 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 PTPN4P29074 926 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ABATP80404 500 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 CDC20Q12834 499 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 TBR1Q16650 682 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 TCTE1Q5JU00 501 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 C1orf189Q5VU69 101 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 RHBDD2Q6NTF9 364 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 AGTRAPQ6RW13 159 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 PCSK4Q6UW60 755 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 CEP128Q6ZU80 1094 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 SLC39A7Q92504 469 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 RBBP8Q99708 897 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 DPH2Q9BQC3 489 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ATG10Q9H0Y0 220 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ACTL8Q9H568 366 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 CAB39LQ9H9S4 337 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 GPAMQ9HCL2 828 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 CCDC177Q9NQR7 707 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 STARD5Q9NSY2 213 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ARL15Q9NXU5 204 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 UTP6Q9NYH9 597 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 ANKMY1Q9P2S6 941 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 SNX7Q9UNH6 387 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 SEC16AO15027 2179 aa17.2■□□□□ 0.34
PDLIM2-206ENST00000409141 NRP2O60462 931 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 SRPX2O60687 465 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 CREG1O75629 220 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 ALAS2P22557 587 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 SPRP35270 261 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 VSX2P58304 361 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 NAE1Q13564 534 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 USP10Q14694 798 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 PCM1Q15154 2024 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 WASHC2DQ5SRD0 308 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 GRTP1Q5TC63 336 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 FBXO42Q6P3S6 717 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 ALKBH8Q96BT7 664 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 TSPAN17Q96FV3 270 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 MED8Q96G25 268 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 CATSPER2Q96P56 530 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 POPDC3Q9HBV1 291 aa17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 DHCR7Q9UBM7 475 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-206ENST00000409141 IGKV1-8A0A0C4DH67 115 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 GUCA1CO95843 209 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ENO2P09104 434 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 RAB40ALP0C0E4 278 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ATXN8OSP0DMR3 200 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ARSFP54793 590 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 AP1S2P56377 157 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 RPS18P62269 152 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 TBPL1P62380 186 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 NAB1Q13506 487 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 GRM7Q14831 915 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms