RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 KIF5AQ12840 1032 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 TMED2Q15363 201 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 FAM214AQ32MH5 1076 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 AARS2Q5JTZ9 985 aaKnown RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 WASHC2DQ5SRD0 308 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 IRAK1BP1Q5VVH5 260 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SP5Q6BEB4 398 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 TTC23LQ6PF05 361 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SHISA6Q6ZSJ9 500 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 COX15Q7KZN9 410 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 LDB1Q86U70 411 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 KCNMB4Q86W47 210 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 KRT222Q8N1A0 295 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 TTC29Q8NA56 475 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 COG1Q8WTW3 980 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 ATG4AQ8WYN0 398 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 PEX13Q92968 403 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 RAD51AP1Q96B01 352 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 HES6Q96HZ4 224 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 VPS50Q96JG6 964 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 LURAP1Q96LR2 239 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SELENOSQ9BQE4 189 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 RAB11FIP5Q9BXF6 653 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 FRMD8P1Q9BZ68 369 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 LHPPQ9H008 270 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SOX17Q9H6I2 414 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 SEMA3GQ9NS98 782 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 NXT1Q9UKK6 140 aaKnown RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF148Q9UQR1 794 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 TCAF1Q9Y4C2 921 aa8.77□□□□□ -1.01
NIF3L1-203ENST00000409129 CACNA1CQ13936 2221 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 HYKKA2RU49 373 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 KPNA5O15131 536 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 CD3EAPO15446 510 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 CTSVO60911 334 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 C1orf105O95561 183 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 IFNB1P01574 187 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 SNRPB2P08579 225 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 ETS1P14921 441 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 TSFMP43897 325 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 TTPAP49638 278 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 VSX2P58304 361 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF169Q14929 603 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 RBBP7Q16576 425 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 TUBB8Q3ZCM7 444 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 PCID2Q5JVF3 399 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 PTRHD1Q6GMV3 140 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 TXLNBQ8N3L3 684 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 RAB42Q8N4Z0 105 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 PPHLN1Q8NEY8 458 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 OR11G2Q8NGC1 345 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 GSDMBQ8TAX9 411 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 HMGCLL1Q8TB92 370 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 GRHL3Q8TE85 626 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 THOC3Q96J01 351 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 PANX3Q96QZ0 392 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 BAG1Q99933 345 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 P2RY12Q9H244 342 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 EPS8L2Q9H6S3 715 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF304Q9HCX3 659 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 CHRAC1Q9NRG0 131 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 RAB6BQ9NRW1 208 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 CATSPERZQ9NTU4 200 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 MARCH4Q9P2E8 410 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 CTSFQ9UBX1 484 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 TTC7AQ9ULT0 858 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 KLK4Q9Y5K2 254 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 MRFAP1Q9Y605 127 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 MAU2Q9Y6X3 613 aa8.76□□□□□ -1.01
NIF3L1-203ENST00000409129 DOCK10Q96BY6 2186 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 LOC105369274A0A096LPK9 316 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 LOC102723532A0A0G2JNH3 316 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 A0A0U1RQJ8 604 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 PRSS44E7EML9 344 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 LRRTM2O43300 516 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 MED26O95402 600 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 APRTP07741 180 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 EDN3P14138 238 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CCNFP41002 786 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CARSP49589 748 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 OCA2Q04671 838 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 KLC1Q07866 573 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 Q0VFX4 171 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CDC16Q13042 620 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 SNX1Q13596 522 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 TLR1Q15399 786 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 TESK1Q15569 626 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CCSMST1Q4G0I0 132 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 SEL1L2Q5TEA6 688 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 B3GNTL1Q67FW5 361 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 FRMPD2BQ6IN97 320 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 ISLR2Q6UXK2 745 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 OTOAQ7RTW8 1153 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 PRUNE1Q86TP1 453 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 LRRC6Q86X45 466 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 OR4N4Q8N0Y3 316 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 METTL27Q8N6F8 245 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms