RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTAGE4Q8IX94 777 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 GPALPP1Q8IXQ4 340 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 KLHDC8AQ8IYD2 350 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 RYBPQ8N488 228 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 EEF2KMTQ96G04 330 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 RUNDC3BQ96NL0 473 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 C1orf21Q9H246 121 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 HSD3B7Q9H2F3 369 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 GSN-AS1Q9NRJ2 163 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 GKN1Q9NS71 199 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 HPF1Q9NWY4 346 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 WWOXQ9NZC7 414 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 NINJ2Q9NZG7 142 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 HMG20BQ9P0W2 317 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRDM4Q9UKN5 801 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PIN4Q9Y237 131 aaKnown RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CHKBQ9Y259 395 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 RPH3AQ9Y2J0 694 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 HBS1LQ9Y450 684 aaKnown RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 H0YIG0 161 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ACOT8O14734 319 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IGHDP01880 384 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TFAP2AP05549 437 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 LIPFP07098 398 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 HSPA8P11142 646 aaKnown RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IRF2P14316 349 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF23P17027 643 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ITGA2P17301 1181 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 AHRP35869 848 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 NPBWR1P48145 328 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TDO2P48775 406 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IRX3P78415 501 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 CX3CL1P78423 397 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ILF2Q12905 390 aaKnown RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ILF3Q12906 894 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TRAF2Q12933 501 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TOR1AIP1Q5JTV8 583 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 NDUFAF5Q5TEU4 345 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR7E24Q6IFN5 339 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 CAPRIN2Q6IMN6 1127 aaKnown RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM166AQ6J272 317 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 RHBDF2Q6PJF5 856 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IL17RELQ6ZVW7 336 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 AQP12AQ8IXF9 295 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 CRYBG2Q8N1P7 616 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 SMRP1Q8NCR6 262 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 RDM1Q8NG50 284 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 UBLCP1Q8WVY7 318 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 SLC13A3Q8WWT9 602 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IRGQQ8WZA9 623 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMEM19Q96HH6 336 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 OXNAD1Q96HP4 312 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 EPSTI1Q96J88 318 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM71F1Q96KD3 344 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 NEURL2Q9BR09 285 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 FSD1Q9BTV5 496 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 S1PR5Q9H228 398 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 SNX25Q9H3E2 840 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 GAREM1Q9H706 876 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF556Q9HAH1 456 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 GMEB2Q9UKD1 530 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 AGTPBP1Q9UPW5 1226 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMED3Q9Y3Q3 217 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 ATP6V0A2Q9Y487 856 aa4.58□□□□□ -1.68
HMGB1P13-201ENST00000406019 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 A0A0B4J203 849 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 RNF103-CHMP3A0A140T963 221 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 E9PI62 339 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 RNF103O00237 685 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 STAM2O75886 525 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 PMS2P2O95744 297 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR3A1P47881 315 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 ART1P52961 327 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 MLLT10P55197 1068 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 EVCP57679 992 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 EEF1A1P68104 462 aaKnown RBP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF415Q09FC8 603 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 MYBPHQ13203 477 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 MFAP5Q13361 173 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 TRA2AQ13595 282 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 SPDYCQ5MJ68 293 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 CYP4A22Q5TCH4 519 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 EEF1A1P5Q5VTE0 462 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 KCTD11Q693B1 232 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 PACS1Q6VY07 963 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF410Q86VK4 478 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 FJX1Q86VR8 437 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 MEX3DQ86XN8 651 aaKnown RBP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 SERPINA12Q8IW75 414 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 CKAP2Q8WWK9 683 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 TAF4BQ92750 862 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 CDCA5Q96FF9 252 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 ABHD8Q96I13 439 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 RUFY1Q96T51 708 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 ABCG8Q9H221 673 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms