RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PGLSO95336 258 aa11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 ZBTB11O95625 1053 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 NUDT17P0C025 328 aa11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 SNHG28P0DPA3 235 aa11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 CCT3P49368 545 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 RPS14P62263 151 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 CWF19L1Q69YN2 538 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 EIF1ADQ8N9N8 165 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 OR13C4Q8NGS5 318 aa11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 ZCCHC3Q9NUD5 404 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 ING4Q9UNL4 249 aa11.78□□□□□ -0.52
CACNA1C-213ENST00000399629 TEX13CA0A0J9YWL9 993 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 AXIN1O15169 862 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 ADAMDEC1O15204 470 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 SCGB2A1O75556 95 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 PSMG1O95456 288 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 SDC2P34741 201 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 PSMD7P51665 324 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 GPR17Q13304 367 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 RAET1LQ5VY80 246 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 RAB43Q86YS6 212 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 SPPL2CQ8IUH8 684 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 NATD1Q8N6N6 113 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 RAB7BQ96AH8 199 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 POFUT2Q9Y2G5 429 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 E7EQ34 232 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 L7N2F9 121 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 MT-ND5P03915 603 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 HBQ1P09105 142 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 ZNF16P17020 682 aaPredicted RBP11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 VAMP2P63027 116 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 SRYQ05066 204 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 SIM2Q14190 667 aaPredicted RBP11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 OCLNQ16625 522 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 LYSMD4Q5XG99 296 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 KIAA0895LQ68EN5 471 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 REP15Q6BDI9 236 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 TMEM225Q6GV28 225 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 PYHIN1Q6K0P9 492 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 PLXDC1Q8IUK5 500 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 PGM2Q96G03 612 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 MRM3Q9HC36 420 aaKnown RBP11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 CTPS2Q9NRF8 586 aa11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 LYARQ9NX58 379 aaKnown RBP11.77□□□□□ -0.52
CACNA1C-213ENST00000399629 ZNF878C9JN71 531 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ITGA5P08648 1049 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 BMPR1AP36894 532 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 OR2B6P58173 313 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 OLR1P78380 273 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 EMC10Q5UCC4 262 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 C1orf189Q5VU69 101 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 UNQ6126/PRO20091Q6UXV3 157 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ACSL5Q9ULC5 683 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 PPM1HQ9ULR3 514 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 BACE2Q9Y5Z0 518 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 FKBP7Q9Y680 259 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 HAS3O00219 553 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 BTN3A3O00478 584 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 GABRDO14764 452 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 SLC7A4O43246 635 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 LRCH4O75427 683 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 TARDBPQ13148 414 aaKnown RBP eCLIP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ARFRP1Q13795 201 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF460Q14592 562 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 SIRPB2Q5JXA9 342 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 NXPE2Q96DL1 559 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 OR1F2PQ96R84 312 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 RBM4BQ9BQ04 359 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 RTKNQ9BST9 563 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 RBM4Q9BWF3 364 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 MAP2K7O14733 419 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 CER1O95813 267 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 CA3P07451 260 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ACVRL1P37023 503 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 CLCN4P51793 760 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 GBX2P52951 348 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 AP3S2P59780 193 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 ARG2P78540 354 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 RUNX3Q13761 415 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 FAM69BQ5VUD6 431 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 TTC27Q6P3X3 843 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 LRRC70Q7Z2Q7 622 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 DNAJA4Q8WW22 397 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 TSACCQ96A04 125 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 HBEGFQ99075 208 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 SLC35A5Q9BS91 424 aa11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 NAA11Q9BSU3 229 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-213ENST00000399629 SLC30A4O14863 429 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 FSCN2O14926 492 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 RRP8O43159 456 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 RNF13O43567 381 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 HLA-DQB2P05538 268 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 BPGMP07738 259 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 CD48P09326 243 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 PCSK2P16519 638 aa11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 ZNF267Q14586 743 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-213ENST00000399629 TMEM35AQ53FP2 167 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms