RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SGSHP51688 502 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 FOXA1P55317 472 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 CXCR4P61073 352 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 NKG7Q16617 165 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 SYT16Q17RD7 645 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 ALFQ53S48 1182 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 PCID2Q5JVF3 399 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 PIK3R6Q5UE93 754 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 RAP1GAP2Q684P5 730 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 ENPP6Q6UWR7 440 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 DENND1CQ8IV53 801 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 MRPL43Q8N983 215 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 OR5K1Q8NHB7 308 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 FBXO30Q8TB52 745 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 PDLIM5Q96HC4 596 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 ITPAQ9BY32 194 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 RANGRFQ9HD47 186 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 CCNB1IP1Q9NPC3 277 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 ABCC13Q9NSE7 274 aa9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 POLR3BQ9NW08 1133 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 CCDC59Q9P031 241 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 TMEFF2Q9UIK5 374 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-205ENST00000398661 MEIOCA2RUB1 952 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZNF840PA6NDX5 716 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 PPP6CO00743 305 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 MRPS14O60783 128 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 FAM20BO75063 409 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 EFCAB14O75071 495 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 CDK14O94921 469 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ERCC2P18074 760 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GADD45AP24522 165 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GABRR2P28476 465 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 LIPAP38571 399 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 DCTP40126 519 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC26A3P40879 764 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ETV6P41212 452 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SERPINH1P50454 418 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SNX16P57768 344 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 RFX4Q33E94 735 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ESCO2Q56NI9 601 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZC3H12BQ5HYM0 836 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KANK2Q63ZY3 851 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 NAPEPLDQ6IQ20 393 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ESRP1Q6NXG1 681 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SYCE2Q6PIF2 218 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 EID3Q8N140 333 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 CACTIN-AS1Q8N1I8 211 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 C2CD4AQ8NCU7 369 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KREMEN2Q8NCW0 462 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 MYLIPQ8WY64 445 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC7A6Q92536 515 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ZNF419Q96HQ0 510 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 FYTTD1Q96QD9 318 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 CCDC32Q9BV29 185 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 ROGDIQ9GZN7 287 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 MID1IP1Q9NPA3 183 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 MAT2BQ9NZL9 334 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 UTS2RQ9UKP6 389 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 BTRCQ9Y297 605 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 LYVE1Q9Y5Y7 322 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 HS3ST4Q9Y661 456 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GREB1Q4ZG55 1949 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KNL1Q8NG31 2342 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 OR5K3A6NET4 321 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 NOS1APO75052 506 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GJB3O75712 270 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 DNTTP04053 509 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GSTM1P09488 218 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 MAGEA11P43364 429 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KCNC1P48547 511 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 PRIM2P49643 509 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 POLR2JP52435 117 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 UFM1P61960 85 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 RPS24P62847 133 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 HERVK_113P63132 956 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 RAD51Q06609 339 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLAMF1Q13291 335 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 RAB33AQ14088 237 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 GPAT3Q53EU6 434 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 CCNJQ5T5M9 372 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 PXDC1Q5TGL8 231 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SDE2Q6IQ49 451 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SPATA19Q7Z5L4 167 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 OR8H2Q8N162 312 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 FBXL6Q8N531 539 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SETD6Q8TBK2 473 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 IGSF8Q969P0 613 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 TMCO6Q96DC7 493 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 OR2A14Q96R47 310 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 KCNA7Q96RP8 456 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 SLC9A7Q96T83 725 aa9.87□□□□□ -0.83
HMGCLL1-205ENST00000398661 APOL4Q9BPW4 351 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms