RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MACROD2A1Z1Q3 448 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 CCDC162PA2VCL2 907 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FITM1A5D6W6 292 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 GPC4O75487 556 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 KLHL18O94889 574 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 METTL18O95568 372 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 PRF1P14222 555 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 CD33P20138 364 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 POU3F2P20265 443 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FDXRP22570 491 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 PKLRP30613 574 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 CCR7P32248 378 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FOXN2P32314 431 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 GRIA3P42263 894 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 OCA2Q04671 838 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TNP2Q05952 138 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 HSPA14Q0VDF9 509 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TBX2Q13207 712 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 POU6F1Q14863 301 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 WASHC2DQ5SRD0 308 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 ATG9BQ674R7 924 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 ZNF324BQ6AW86 544 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 PRMT9Q6P2P2 845 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FAM180AQ6UWF9 173 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 UNC5DQ6UXZ4 953 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 NAPRTQ6XQN6 538 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 LINC00696Q6ZRV3 163 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 COX15Q7KZN9 410 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 MCEMP1Q8IX19 187 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FAM20CQ8IXL6 584 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 KBTBD2Q8IY47 623 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FAM71DQ8N9W8 422 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 LMNTD1Q8N9Z9 388 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TTC29Q8NA56 475 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 OR1N1Q8NGS0 311 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 OR2L8Q8NGY9 312 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 HAS2Q92819 552 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 CNDP1Q96KN2 507 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FAM118BQ9BPY3 351 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 SELENOSQ9BQE4 189 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TRIM56Q9BRZ2 755 aaKnown RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 MENTQ9BUN1 341 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TSSK1BQ9BXA7 367 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 PHACTR1Q9C0D0 580 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 ZNF304Q9HCX3 659 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 SLC39A10Q9ULF5 831 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 RIMKLBQ9ULI2 386 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 KLHL20Q9Y2M5 609 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 KLK4Q9Y5K2 254 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 KLF2Q9Y5W3 355 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-208ENST00000397204 MRFAP1Q9Y605 127 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 FER1L5A0AVI2 2057 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 TRAV17A0A0B4J275 112 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 DYTNA2CJ06 578 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 HYKKA2RU49 373 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 ERI2A8K979 691 aaKnown RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 PRSS44E7EML9 344 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 RASGRF2O14827 1237 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 PCDH17O14917 1159 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 PRICKLE3O43900 615 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 OR1I1O60431 355 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 USP1O94782 785 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 SLCO2B1O94956 709 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 GAS8O95995 478 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 HPP00738 406 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 APOA4P06727 396 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 MYBL2P10244 700 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 ACPPP15309 386 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 MCM3P25205 808 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 OR1D4P47884 311 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 Q0VFX4 171 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 GRB7Q14451 532 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 INAQ16352 499 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 P3H1Q32P28 736 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 SHISA6Q6ZSJ9 500 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 NDUFAF7Q7L592 441 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 FJX1Q86VR8 437 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 DCUN1D3Q8IWE4 304 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 C2orf73Q8N5S3 287 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 CATSPER1Q8NEC5 780 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 DNAJB8Q8NHS0 232 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 CFAP61Q8NHU2 1237 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 HMGCLL1Q8TB92 370 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 STT3BQ8TCJ2 826 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 PSMF1Q92530 271 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 HDAC10Q969S8 669 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 RAD51AP1Q96B01 352 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 MIEF2Q96C03 454 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 CRB3Q9BUF7 120 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 RAB11FIP5Q9BXF6 653 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 UNKQ9C0B0 810 aaKnown RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 CTSFQ9UBX1 484 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 ZNF282Q9UDV7 671 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-208ENST00000397204 CDC14AQ9UNH5 594 aa8.36□□□□□ -1.07
CAPN3-208ENST00000397204 PCNX1Q96RV3 2341 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms