RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 HGH1Q9BTY7 390 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 OR52A5Q9H2C5 316 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 SMOC1Q9H4F8 434 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 RDH14Q9HBH5 336 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 PRDM8Q9NQV8 689 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 FAM86C1Q9NVL1 165 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 PSMD13Q9UNM6 376 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 DOLKQ9UPQ8 538 aa14.46□□□□□ -0.09
CAPN3-207ENST00000397200 ATP6AP2A0A1C7CYW4 349 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 BBIP1A8MTZ0 92 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 NVLO15381 856 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 FFAR2O15552 330 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 AQP9O43315 295 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 SDC3O75056 442 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 ATP6AP2O75787 350 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 CER1O95813 267 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 SNRPB2P08579 225 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 LBPP18428 481 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 PRDX3P30048 256 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 NBL1P41271 181 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 STX1BP61266 288 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 ABRQ12979 859 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 ART3Q13508 389 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 CEACAM7Q14002 265 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 GSTA3Q16772 222 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 TCHHL1Q5QJ38 904 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 PLA2G2CQ5R387 149 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 RNF165Q6ZSG1 346 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 GPRIN3Q6ZVF9 776 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 SPATA19Q7Z5L4 167 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 SDR16C5Q8N3Y7 309 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 CCDC124Q96CT7 223 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 MRPL1Q9BYD6 325 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 GAREM1Q9H706 876 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 SDR39U1Q9NRG7 319 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 TAAR2Q9P1P5 351 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 TBC1D29Q9UFV1 150 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 PTBP2Q9UKA9 531 aaKnown RBP14.45□□□□□ -0.1
CAPN3-207ENST00000397200 PCDHGA7Q9Y5G6 932 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 PTGDR2Q9Y5Y4 395 aa14.45□□□□□ -0.1
CAPN3-207ENST00000397200 A0A1B0GTQ1 180 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 NCF1BA6NI72 391 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 NCF1CA8MVU1 366 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 YKT6O15498 198 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 NCF1P14598 390 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 HALP42357 657 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 MAPK9P45984 424 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 GRB7Q14451 532 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TAF11Q15544 211 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 UAP1L1Q3KQV9 507 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 CDKL4Q5MAI5 379 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 WASH2PQ6VEQ5 465 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 FRA10AC1Q70Z53 315 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 CDRT15Q96T59 188 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 GTPBP2Q9BX10 602 aaKnown RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 WASH6PQ9NQA3 447 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TMEM45AQ9NWC5 275 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 CCDC167Q9P0B6 97 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 WDR37Q9Y2I8 494 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 VPS13AQ96RL7 3174 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 H3BNX3 289 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TAPBPO15533 448 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 NRP2O60462 931 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 S100BP04271 92 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 C8GP07360 202 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ANXA6P08133 673 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 IDO1P14902 403 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ENGP17813 658 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 EPHA8P29322 1005 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 GTF2A1P52655 376 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 SESN3P58005 492 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ERVPABLB-1P60509 514 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 BNIP3Q12983 259 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 SHBQ15464 509 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 FBXO48Q5FWF7 155 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 COQ5Q5HYK3 327 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TCEAL6Q6IPX3 200 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ABRAXAS1Q6UWZ7 409 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 RNF111Q6ZNA4 994 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 GOLGA7Q7Z5G4 137 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 DDIASQ8IXT1 998 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 FAM46DQ8NEK8 389 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 OR9I1Q8NGQ6 314 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TSPEARQ8WU66 669 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 DNAJC9Q8WXX5 260 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 TCEAL3Q969E4 200 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 NAF1Q96HR8 494 aaKnown RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 RSRC1Q96IZ7 334 aaKnown RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 C12orf66Q96MD2 445 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 BRINP2Q9C0B6 783 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 PFDN4Q9NQP4 134 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 AIG1Q9NVV5 245 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 UCKL1Q9NWZ5 548 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 SUCOQ9UBS9 1254 aaKnown RBP14.44□□□□□ -0.1
CAPN3-207ENST00000397200 ADAMTS6Q9UKP5 1117 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 PCOLCE2Q9UKZ9 415 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 BTRCQ9Y297 605 aa14.44□□□□□ -0.1
CAPN3-207ENST00000397200 GPR45Q9Y5Y3 372 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms