RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ANKDD1AQ495B1 522 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 OR2T5Q6IEZ7 315 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 CHST9Q7L1S5 443 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 LGI4Q8N135 537 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 JAGN1Q8N5M9 183 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 OR2T29Q8NH02 315 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 NEDD4LQ96PU5 975 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 PCDHB18PQ96TA0 734 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 USP29Q9HBJ7 922 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 DISC1C4P0D8 188 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 B4GALT5O43286 388 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 HSD3B1P14060 373 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 PRPS1L1P21108 318 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 TUBG1P23258 451 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 CATSPERGQ6ZRH7 1159 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SNX29P2Q8IUI4 249 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 SCP2D1Q9UJQ7 156 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 ZFP37Q9Y6Q3 630 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-202ENST00000396578 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
COL4A3-202ENST00000396578 A0A1B0GVM2 712 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 K7EPI3 171 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 CILPO75339 1184 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA31C1P0DKV0 1188 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TACR2P21452 398 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PLA2G16P53816 162 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 GATAD2BQ8WXI9 593 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TAS2R10Q9NYW0 307 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 M0R233 179 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PI15O43692 258 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 POP4O95707 220 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 NDRG1Q92597 394 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 COPS5Q92905 334 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TM9SF3Q9HD45 589 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ENPP3O14638 875 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 CDRT1O95170 752 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 MAPK3P27361 379 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 NATD1Q8N6N6 113 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PFDN5Q99471 154 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 C2orf92A0A1B0GVN3 265 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF670-ZNF695F2Z2N8 137 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SSX5O60225 188 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ARL6IP5O75915 188 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 H1F0P07305 194 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 CXCL9Q07325 125 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 NCEH1Q6PIU2 408 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM110Q86TL2 294 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 OVCA2Q8WZ82 227 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 MAGEH1Q9H213 219 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 XPNPEP2O43895 674 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PRKCHP24723 683 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SLC51AQ86UW1 340 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 AURKBQ96GD4 344 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SLC38A3Q99624 504 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ERVK-11Q9UQG0 969 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 MT-CYBP00156 380 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 CXCR1P25024 350 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 VGLL4Q14135 290 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 ARSHQ5FYA8 562 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PM20D2Q8IYS1 436 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 SMG8Q8ND04 991 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 COQ8AQ8NI60 647 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 GSKIPQ9P0R6 139 aa13.66□□□□□ -0.22
COL4A3-202ENST00000396578 BAZ2AQ9UIF9 1905 aaKnown RBP13.66□□□□□ -0.22
COL4A3-202ENST00000396578 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 JAM2P57087 298 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ERVK-21P61565 698 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 UBXN11Q5T124 520 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 APOBEC3HQ6NTF7 200 aaKnown RBP13.65□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 SERINC1Q9NRX5 453 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ARPC2O15144 300 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 F8A1P23610 371 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 DSTNP60981 165 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 SMPDL3BQ92485 455 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ARMC5Q96C12 935 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 HSPBAP1Q96EW2 488 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 A0A1W2PRB8 838 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 RHPN2P1A8MT19 583 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 CLIC1O00299 241 aa13.65□□□□□ -0.22
COL4A3-202ENST00000396578 SCDO00767 359 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms