RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PNMA8CA0A1B0GUJ8 204 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 SLC25A14O95258 325 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PRLP01236 227 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
CLIP2-203ENST00000395060 SMARCB1Q12824 385 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PLEKHG6Q3KR16 790 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 ATXN7L2Q5T6C5 722 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-203ENST00000395060 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 NADSYN1Q6IA69 706 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 CYP2U1Q7Z449 544 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 LRRC49Q8IUZ0 686 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 ZNF683Q8IZ20 524 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 DEPDC4Q8N2C3 294 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 TEX26Q8N6G2 289 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 SPPL2AQ8TCT8 520 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 TXNDC15Q96J42 360 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 CCDC115Q96NT0 180 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PANX1Q96RD7 426 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 REEP1Q9H902 201 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 TMEM184CQ9NVA4 438 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 PRSS21Q9Y6M0 314 aa13.93□□□□□ -0.18
CLIP2-203ENST00000395060 METTL15A6NJ78 407 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 H3BM21 787 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 PTHP01270 115 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 FABP3P05413 133 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 POU1F1P28069 291 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 NPRL3Q12980 569 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 GDF6Q6KF10 455 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 NRARPQ7Z6K4 114 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 TMEM132CQ8N3T6 1108 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 STX19Q8N4C7 294 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 APH1BQ8WW43 257 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 CLSTN3Q9BQT9 956 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 CPNE5Q9HCH3 593 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ARIH1Q9Y4X5 557 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ZFP37Q9Y6Q3 630 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 PABPN1LA6NDY0 278 aaKnown RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 NOTOA8MTQ0 251 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 KMOO15229 486 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 GRK3P35626 688 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 OR1G1P47890 313 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 TTPAP49638 278 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 CCL23P55773 120 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 MXD1Q05195 221 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 USP39Q53GS9 565 aaKnown RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ATAD3CQ5T2N8 411 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 VANGL1Q8TAA9 524 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 TRIB2Q92519 343 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 RLIMQ9NVW2 624 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 UBA2Q9UBT2 640 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-203ENST00000395060 ZNF221Q9UK13 617 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 PPT2Q9UMR5 302 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 PCDHGB6Q9Y5F9 930 aa13.92□□□□□ -0.18
CLIP2-203ENST00000395060 CCRL2O00421 344 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 PDYNP01213 254 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ENGP17813 658 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 AADATQ8N5Z0 425 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 AMER2Q8N7J2 671 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 SH3GL1Q99961 368 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 CPPED1Q9BRF8 314 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ACPTQ9BZG2 426 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ARHGAP39Q9C0H5 1083 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 MMP28Q9H239 520 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 PAQR5Q9NXK6 330 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-203ENST00000395060 HAS3O00219 553 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 IFRD1O00458 451 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-203ENST00000395060 INSIG1O15503 277 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 APOA1P02647 267 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 IL6P05231 212 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ACPPP15309 386 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 HOXB8P17481 243 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-203ENST00000395060 RRM2P31350 389 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 THPOP40225 353 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 SGSHP51688 502 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 CLCN7P51798 805 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 RFX4Q33E94 735 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 LRRC66Q68CR7 880 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 KDM4DQ6B0I6 523 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 CD300LGQ6UXG3 332 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 SIX5Q8N196 739 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 CYP4Z2PQ8N1L4 340 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 LILRB4Q8NHJ6 448 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ZNF675Q8TD23 568 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 DEPDC7Q96QD5 511 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CLIP2-203ENST00000395060 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms