RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 RAVER1Q8IY67 606 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 CHDHQ8NE62 594 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 HMGCLL1Q8TB92 370 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 FRS2Q8WU20 508 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 UBE2E3Q969T4 207 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 SMIM14Q96QK8 99 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 PEX16Q9Y5Y5 336 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 STC2O76061 302 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 MT-ND2P03891 347 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 EPORP19235 508 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 MATN1P21941 496 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 WEE1P30291 646 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 OPRL1P41146 370 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 MAP2K4P45985 399 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 CARTPTQ16568 116 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 XKR7Q5GH72 579 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 PDZK1Q5T2W1 519 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF783Q6ZMS7 281 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 C11orf96Q7Z7L8 435 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 BPIFB1Q8TDL5 484 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 SLC22A17Q8WUG5 538 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 CNDP2Q96KP4 475 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 FAM83DQ9H4H8 585 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 NECTIN3Q9NQS3 549 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF282Q9UDV7 671 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 CD84Q9UIB8 345 aa11.36□□□□□ -0.59
UBE2D3-209ENST00000394804 A0A1W2PQ67 120 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 PDYNP01213 254 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 AGXTP21549 392 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 HRH2P25021 359 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TUBA1BP68363 451 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ADARB1P78563 741 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 VMACQ2NL98 169 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 COLEC12Q5KU26 742 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CTSL3PQ5NE16 218 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 C11orf74Q86VG3 221 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF557Q8N988 423 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 OR10G2Q8NGC3 310 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 MCMBPQ9BTE3 642 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 GPN2Q9H9Y4 310 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TPT1P8Q9HAU6 139 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 FZD4Q9ULV1 537 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 OR2AG2A6NM03 316 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 LOC110117498-PIK3R3F6TDL0 507 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 MYL12AP19105 171 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ITIH1P19827 911 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 KDELR2P33947 212 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TM4SF4P48230 202 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 RAPSNQ13702 412 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CYP2A13Q16696 494 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ANKDD1AQ495B1 522 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TMC5Q6UXY8 1006 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 MBOAT1Q6ZNC8 495 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 IGFN1Q86VF2 1251 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 SLC22A16Q86VW1 577 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 WDR36Q8NI36 951 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 FAM110BQ8TC76 370 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 OVCA2Q8WZ82 227 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 GTF2H4Q92759 462 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 KCNC2Q96PR1 638 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 BCL7BQ9BQE9 202 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ANKHQ9HCJ1 492 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 DCAF13Q9NV06 445 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 H2AFY2Q9P0M6 372 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ENPP5Q9UJA9 477 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CAB39Q9Y376 341 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 YIPF1Q9Y548 306 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 PCDHB14Q9Y5E9 798 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 HSPE1-MOB4S4R3N1 261 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 PABPC1P11940 636 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ACRV1P26436 265 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CD97P48960 835 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 PRKCZQ05513 592 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 DNASE1L3Q13609 305 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TPRG1Q6ZUI0 275 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 DCP2Q8IU60 420 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 OR2AP1Q8NGE2 309 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF583Q96ND8 569 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 BOCQ9BWV1 1114 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF840PA6NDX5 716 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 H0Y858 1186 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 KPNA3O00505 521 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 POLR2EP19388 210 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 SLC6A4P31645 630 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 HNF4AP41235 474 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 GRSF1Q12849 480 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CDK5R2Q13319 367 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 RUNDC3AQ59EK9 446 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 TYW3Q6IPR3 259 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 CAPN13Q6MZZ7 669 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 NOXRED1Q6NXP6 359 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms