RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ITGAMP11215 1152 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 PRPS2P11908 318 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 SELPP16109 830 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 KIR3DL1P43629 444 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 PRAMEF9Q5VWM5 478 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 ATG16L2Q8NAA4 619 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 SETD9Q8NE22 299 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 RPL3LQ92901 407 aaKnown RBP13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 VN1R3Q9BXE9 311 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CD84Q9UIB8 345 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CLIC1O00299 241 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 MTX2O75431 263 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 GABARAPO95166 117 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 COL6A1P12109 1028 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 NSG1P42857 185 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 IL18R1Q13478 541 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 ZNF783Q6ZMS7 281 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 ADCK1Q86TW2 530 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 CLECL1Q8IZS7 167 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 NELL1Q92832 810 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 COPS8Q99627 209 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 C2orf49Q9BVC5 232 aaPredicted RBP13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 SCN3BQ9NY72 215 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 B3GNT3Q9Y2A9 372 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
GAPVD1-205ENST00000394084 PDE4DIPQ5VU43 2346 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 KRBA1A5PL33 1030 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HOXB9P17482 250 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 STK19P49842 368 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 SLC35A2P78381 396 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 IFITM3Q01628 133 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ZC3H12BQ5HYM0 836 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 DGKKQ5KSL6 1271 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 SYT12Q8IV01 421 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 PRDM8Q9NQV8 689 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 DNMT3BQ9UBC3 853 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 A0A1W2PQ45 241 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 A0A1W2PQY0 241 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 KPNA4O00629 521 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 FABP3P05413 133 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 AQP1P29972 269 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 MAGEA2P43356 314 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 CLCA4Q14CN2 919 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 GPR33Q49SQ1 333 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 LYPLAL1Q5VWZ2 237 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 CYP2U1Q7Z449 544 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ADAMTS19Q8TE59 1207 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 TMEM165Q9HC07 324 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 IL1RAPQ9NPH3 570 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 AKIP1Q9NQ31 210 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 ERVK-11Q9UQG0 969 aa13.54□□□□□ -0.24
GAPVD1-205ENST00000394084 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 CTSOP43234 321 aaPredicted RBP13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 DNASE1L3Q13609 305 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 ACOX1Q15067 660 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 MAPK11Q15759 364 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 INAQ16352 499 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 VMACQ2NL98 169 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 AHSA2Q719I0 299 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 FBLIM1Q8WUP2 373 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 ZNF566Q969W8 418 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 CMTM7Q96FZ5 175 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 TM9SF3Q9HD45 589 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 SIRT5Q9NXA8 310 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 PMF1-BGLAPU3KQ54 211 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 PABPN1LA6NDY0 278 aaKnown RBP13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 PRRG1O14668 218 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 LCKP06239 509 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 COX7A2P14406 83 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 CHIT1Q13231 466 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 KDM4DQ6B0I6 523 aa13.53□□□□□ -0.24
GAPVD1-205ENST00000394084 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms