RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 IFT80Q9P2H3 777 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZNF221Q9UK13 617 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 TCRBV3S1A0A5B6 114 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 XYLBO75191 536 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 RFPL2O75678 378 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 FGF18O76093 207 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ELK4P28324 431 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 BMXP51813 675 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 RPL26P61254 145 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 RCAN2Q14206 197 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 INTS11Q5TA45 600 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 FRG2Q64ET8 278 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 CXorf57Q6NSI4 855 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 RFLNAQ6ZTI6 216 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TMEM25Q86YD3 366 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 GLB1L3Q8NCI6 653 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 PROKR1Q8TCW9 393 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 LKAAEAR1Q8TD35 194 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 FRG2BQ96QU4 278 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 MIR1-1HGQ9H1L0 117 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZNF334Q9HCZ1 680 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 SNTNA6NMZ2 147 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 A8MV72 311 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TSPAN4O14817 238 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TRIM24O15164 1050 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TBX1O43435 398 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 BCKDHAP12694 445 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TYRP14679 529 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 EPORP19235 508 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 IGFBP5P24593 272 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 IL12AP29459 219 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 RFC2P35250 354 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 WASP42768 502 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 HK3P52790 923 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 CBLBQ13191 982 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 CCNYL2Q5T2Q4 361 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 DEPDC1Q5TB30 811 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 DTWD1Q8N5C7 304 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 CHST14Q8NCH0 376 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZNF540Q8NDQ6 660 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 GPR26Q8NDV2 337 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 EPS8L2Q9H6S3 715 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 PDP1Q9P0J1 537 aaPredicted RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 PLOD2O00469 737 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 E2F3O00716 465 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ATG13O75143 517 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PDYNP01213 254 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ATP1B2P14415 290 aaPredicted RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 ENDOUP21128 410 aaKnown RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 ETV3P41162 512 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 IL12RB1P42701 662 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 DEFB103AP81534 67 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 TEAD2Q15562 447 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 LCN8Q6JVE9 175 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 CNKSR3Q6P9H4 555 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 UBE2Q1Q7Z7E8 422 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 GALNT7Q86SF2 657 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ADGRG5Q8IZF4 528 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 MYRFLQ96LU7 910 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 APOL4Q9BPW4 351 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 EPB41L1Q9H4G0 881 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 VAPAQ9P0L0 249 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 TRPC4Q9UBN4 977 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 RIMKLBQ9ULI2 386 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 H3BNH8 94 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 SCELO95171 688 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 C8GP07360 202 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 EBLN1P0CF75 366 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 CCL5P13501 91 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ZNF26P17031 533 aaPredicted RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 ARSFP54793 590 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 AAK1Q2M2I8 961 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ARMC4Q5T2S8 1044 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 ENPP6Q6UWR7 440 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 OTULINQ96BN8 352 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 MYOCQ99972 504 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 RBM4BQ9BQ04 359 aaKnown RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 RBM4Q9BWF3 364 aaKnown RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 DNAJB9Q9UBS3 223 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 RPS6KA6Q9UK32 745 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 BCKDKO14874 412 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 TLL1O43897 1013 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 GUCY1B2O75343 617 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PRPS2P11908 318 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 HMGA1P17096 107 aaKnown RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 BDKRB1P46663 353 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 PIGFQ07326 219 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 EPS8Q12929 822 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 MRPL58Q14197 206 aaKnown RBP10.25□□□□□ -0.77
CALD1-203ENST00000393118 HKDC1Q2TB90 917 aa10.25□□□□□ -0.77
CALD1-203ENST00000393118 CRTC1Q6UUV9 634 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms