RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 MAELQ96JY0 434 aaKnown RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 DNAJC18Q9H819 358 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 VNN3Q9NY84 501 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 ZNF282Q9UDV7 671 aaPredicted RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 C19orf25Q9UFG5 118 aaPredicted RBP0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 MEGF6O75095 1541 aa0.72□□□□□ -2.29
RNU6-239P-201ENST00000390990 A0A1B0GTH9 108 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 GLTPD2A6NH11 291 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 MAGEB4O15481 346 aaPredicted RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 SSX4O60224 188 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 LYPD3O95274 346 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 MYOGP15173 224 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ACHEP22303 614 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ABCD3P28288 659 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 MATKP42679 507 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRA2AQ13595 282 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 CYLC2Q14093 348 aaPredicted RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 TMEM44Q2T9K0 475 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF658BQ4V348 819 aaPredicted RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 NHLRC3Q5JS37 347 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 SLC9C2Q5TAH2 1124 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ACSM2BQ68CK6 577 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF544Q6NX49 715 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 INO80CQ6PI98 192 aaPredicted RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 TMUB2Q71RG4 321 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 KRT77Q7Z794 578 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 LRRTM4Q86VH4 590 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR2AJ1Q8NGZ0 328 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 GTSF1Q8WW33 167 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 HVCN1Q96D96 273 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ELMOD3Q96FG2 381 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 PERPQ96FX8 193 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 C4orf45Q96LM5 186 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 HNRNPABQ99729 332 aaKnown RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 DPAGT1Q9H3H5 408 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 CUTCQ9NTM9 273 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 PAG1Q9NWQ8 432 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 NLGN3Q9NZ94 848 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 AMACRQ9UHK6 382 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 TAGLN3Q9UI15 199 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 CYP46A1Q9Y6A2 500 aa0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZFP37Q9Y6Q3 630 aaPredicted RBP0.71□□□□□ -2.3
RNU6-239P-201ENST00000390990 CDC42BPBQ9Y5S2 1711 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 NPIPB15A6NHN6 443 aaPredicted RBP0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 K7EQG2 157 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 XRCC3O43542 346 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR10H2O60403 315 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF253O75346 499 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 JAK1P23458 1154 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 MNDAP41218 407 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 TBX4P57082 545 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 RPL7AP62424 266 aaKnown RBP0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 SRPXP78539 464 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 NIPAL4Q0D2K0 466 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 KIAA0141Q14154 515 aaPredicted RBP0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 SLC22A6Q4U2R8 563 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 ZNF506Q5JVG8 444 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 ELFN2Q5R3F8 820 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CCSAPQ6IQ19 270 aaPredicted RBP0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CGB2Q6NT52 195 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 IRGCQ6NXR0 463 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CFAP77Q6ZQR2 320 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 ANKRD13AQ8IZ07 590 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 AVL9Q8NBF6 648 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 MOSPD2Q8NHP6 518 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 AFAP1L1Q8TED9 768 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CCT6BQ92526 530 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CCDC136Q96JN2 1154 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 OR2A14Q96R47 310 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 TAAR6Q96RI8 345 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 TBX15Q96SF7 602 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 CCDC3Q9BQI4 270 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 MIS12Q9H081 205 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 DHRS4-AS1Q9P1J3 65 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRIM17Q9Y577 477 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 R4GN57 208 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 ARID2Q68CP9 1835 aa0.7□□□□□ -2.3
RNU6-239P-201ENST00000390990 TRBV4-1A0A0J9YWV2 114 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 PINLYPA6NC86 204 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 C17orf51A8MQB3 221 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 TNFSF11O14788 317 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 SURF4O15260 269 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 DFNA5O60443 496 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 WISP3O95389 354 aaPredicted RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 SEMA4FO95754 770 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 UBL4AP11441 157 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ODC1P11926 461 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ACTN1P12814 892 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 NR2C1P13056 603 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 GPX3P22352 226 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 EDNRAP25101 427 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ELAVL4P26378 380 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 RPL34P49207 117 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 MEOX2P50222 304 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 DNA2P51530 1060 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 ERVK-16P61578 105 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 LMOD3Q0VAK6 560 aa0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 EIF4A2Q14240 407 aaKnown RBP0.69□□□□□ -2.3
RNU6-239P-201ENST00000390990 UPP1Q16831 310 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms