RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 RAD51AP1Q96B01 352 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 TVP23BQ9NYZ1 205 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 TMEM181Q9P2C4 612 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 A0A0J9YVX5 310 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 BCAP31P51572 246 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 ACLYP53396 1101 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 INHBCP55103 352 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 TUBA1BP68363 451 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 LRP8Q14114 963 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 ATG9BQ674R7 924 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 TUBA1AQ71U36 451 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 IZUMO1Q8IYV9 350 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 POFUT2Q9Y2G5 429 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 ZNF780BQ9Y6R6 833 aa12.4□□□□□ -0.42
DNMT3A-204ENST00000380756 MAST2Q6P0Q8 1798 aa12.4□□□□□ -0.43
DNMT3A-204ENST00000380756 WBP4O75554 376 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 SDC2P34741 201 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CAPZA2P47755 286 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 PMS2P3Q13401 168 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 DNASE1L3Q13609 305 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 IL18Q14116 193 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 SEMA3AQ14563 771 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ZNF544Q6NX49 715 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CXXC5Q7LFL8 322 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CDH24Q86UP0 819 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ZMIZ2Q8NF64 920 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ADAMTS15Q8TE58 950 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 FERD3LQ96RJ6 166 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 SEZ6LQ9BYH1 1024 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 SAP18O00422 153 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 PI15O43692 258 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 HPRP00739 348 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 FBXO43Q4G163 708 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 KANK2Q63ZY3 851 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TPRG1Q6ZUI0 275 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 FUBP1Q96AE4 644 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 SLC35A5Q9BS91 424 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 EFCAB11Q9BUY7 163 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 MOV10Q9HCE1 1003 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 KNL1Q8NG31 2342 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 HMX2A2RU54 273 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ACOX3O15254 700 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 DYRK3O43781 588 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TGFB1P01137 390 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CBSLP0DN79 551 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 BCKDHAP12694 445 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CBSP35520 551 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 IST1P53990 364 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 NFATC3Q12968 1075 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TXNDC8Q6A555 127 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 BICRALQ6AI39 1079 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 LARP4Q71RC2 724 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 NXPE1Q8N323 547 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 KCNH6Q9H252 994 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 BOLA2-SMG1P6H3BVE0 249 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 DNAJB5O75953 348 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 DHFRP00374 187 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 LAG3P18627 525 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CLCN4P51793 760 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 RAB25P57735 213 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 RGS8P57771 180 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 GK3PQ14409 553 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 MAVSQ7Z434 540 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 DCAF4L2Q8NA75 395 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TFAP2CQ92754 450 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 CMTM7Q96FZ5 175 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ART5Q96L15 291 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 ZNF222Q9UK12 451 aa12.39□□□□□ -0.43
DNMT3A-204ENST00000380756 TPST2O60704 377 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 TCF3P15923 654 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 STAT5AP42229 794 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 HTR6P50406 440 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 CCR4P51679 360 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 ATP12AP54707 1039 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 SLBPQ14493 270 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 FAM118AQ9NWS6 357 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 PCTPQ9UKL6 214 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
DNMT3A-204ENST00000380756 ITM2BQ9Y287 266 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms