RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ENTPD1P49961 510 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 DUOXA1Q1HG43 343 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 UTS2BQ765I0 119 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CACUL1Q86Y37 369 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CFAP206Q8IYR0 622 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TMEM199Q8N511 208 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 OR8H1Q8NGG4 311 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 FBXL8Q96CD0 374 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ZNF641Q96N77 438 aaPredicted RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 DEC1Q9P2X7 70 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 FCF1Q9Y324 198 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 HS3ST4Q9Y661 456 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ANKRD66B4E2M5 251 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 PPEF2O14830 753 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 RNASEH2AO75792 299 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 GLUD1P00367 558 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ZNF865P0CJ78 1059 aaPredicted RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 AMD1P17707 334 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 ENGP17813 658 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 LEPRP48357 1165 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 HSF2Q03933 536 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MXD1Q05195 221 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 CEACAM7Q14002 265 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SPIN4Q56A73 249 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 COQ5Q5HYK3 327 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 COLEC12Q5KU26 742 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS36-201ENST00000378060 ADNP2Q6IQ32 1131 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MINDY1Q8N5J2 469 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 OR4F6Q8NGB9 312 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 VMP1Q96GC9 406 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 KCTD7Q96MP8 289 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MTERF1Q99551 399 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 MMP27Q9H306 513 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 TRIT1Q9H3H1 467 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 AMBNQ9NP70 447 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 IMP3Q9NV31 184 aaKnown RBP8.19□□□□□ -1.1
VPS36-201ENST00000378060 TVP23BQ9NYZ1 205 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 MAT2BQ9NZL9 334 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 SCML2Q9UQR0 700 aa8.19□□□□□ -1.1
VPS36-201ENST00000378060 NRP1O14786 923 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 HPRP00739 348 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PEPDP12955 493 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 GSTM3P21266 225 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 HSD17B2P37059 387 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CRISP3P54108 245 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 ARPC4P59998 168 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CYP4F8P98187 520 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TLR1Q15399 786 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SF1Q15637 639 aaKnown RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 TECRLQ5HYJ1 363 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 RANBP3LQ86VV4 465 aaPredicted RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 ADGRG2Q8IZP9 1017 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 OR8J3Q8NGG0 315 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SLC35G5Q96KT7 338 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 ZNF382Q96SR6 550 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SMOQ99835 787 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SYT11Q9BT88 431 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TOR3AQ9H497 397 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NECTIN3Q9NQS3 549 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 M0QX08 132 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TP73O15350 636 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PDPK1O15530 556 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NOS1APO75052 506 aaPredicted RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 RLN1P04808 185 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 YES1P07947 543 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 G6PDP11413 515 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CSTF2P33240 577 aaKnown RBP eCLIP8.18□□□□□ -1.1
VPS36-201ENST00000378060 RPS24P62847 133 aaKnown RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 SCARB2Q14108 478 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SLC9A5Q14940 896 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 KCNA10Q16322 511 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 C6orf136Q5SQH8 315 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 KIAA1614Q5VZ46 1190 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PEX5LQ8IYB4 626 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 ANKFN1Q8N957 763 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 KCNS3Q9BQ31 491 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 HTATIP2Q9BUP3 242 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 C1QTNF1Q9BXJ1 281 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 SMURF2Q9HAU4 748 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 FBRSL1Q9HCM7 1045 aaKnown RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 C11orf16Q9NQ32 467 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SEC14L4Q9UDX3 406 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 MRTO4Q9UKD2 239 aaKnown RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 FZD4Q9ULV1 537 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SH3PXD2BA1X283 911 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 KLHL33A6NCF5 533 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 J3KR12 359 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PIRO00625 290 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NDUFB5O43674 189 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CXCL14O95715 111 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 ETV4P43268 484 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 HLCSP50747 726 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CCL23P55773 120 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TARDBPQ13148 414 aaKnown RBP eCLIP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms