RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ADRB3P13945 408 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAGP20916 626 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 OXTRP30559 389 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RPL34P49207 117 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 GALK1P51570 392 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 ARHGDIAP52565 204 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 HK2P52789 917 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MANFP55145 182 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 ACTR3P61158 418 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 RPS14P62263 151 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SELPLGQ14242 412 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 PRRT3Q5FWE3 981 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CCNYL2Q5T2Q4 361 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 KIAA1211LQ6NV74 962 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 DEF8Q6ZN54 512 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 GALNT13Q8IUC8 556 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SLC9A6Q92581 669 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 FBXL20Q96IG2 436 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 SAMD11Q96NU1 681 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 ZCCHC2Q9C0B9 1178 aaKnown RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 IL21RQ9HBE5 538 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAGEE1Q9HCI5 957 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 MAP10Q9P2G4 905 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 LEF1Q9UJU2 399 aaPredicted RBP7.88□□□□□ -1.15
CKAP2-203ENST00000378037 PCTPQ9UKL6 214 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 LZTS1Q9Y250 596 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 PCDHB1Q9Y5F3 818 aa7.88□□□□□ -1.15
CKAP2-203ENST00000378037 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ARHGEF33A8MVX0 844 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 FPGTO14772 594 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 HNRNPCL1O60812 293 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 PRKD3O94806 890 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 LDLRP01130 860 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 EPOP01588 193 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 VIPR1P32241 457 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TAS2R50P59544 299 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TBPL1P62380 186 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 DAB2P98082 770 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TMED1Q13445 227 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 DOC2AQ14183 400 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 MINDY4Q4G0A6 757 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 CAPN13Q6MZZ7 669 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 VTCN1Q7Z7D3 282 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 OR4A15Q8NGL6 344 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 WDR48Q8TAF3 677 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 SLC13A3Q8WWT9 602 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 NELL1Q92832 810 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ZFRQ96KR1 1074 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 GPR78Q96P69 363 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 MYADMQ96S97 322 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ATOH8Q96SQ7 321 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TTLL2Q9BWV7 592 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ATXN10Q9UBB4 475 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 FAF1Q9UNN5 650 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TDRD15B5MCY1 1934 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ARHGEF17Q96PE2 2063 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ARID2Q68CP9 1835 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 IGLV3-10A0A075B6K4 115 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 MROH6A6NGR9 719 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 EPN2O95208 641 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 GRK3P35626 688 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 CCNIQ14094 377 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 RFTN1Q14699 578 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 PDK3Q15120 406 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 FRG2Q64ET8 278 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ARMC6Q6NXE6 501 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ERN2Q76MJ5 926 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 NET1Q7Z628 596 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ADIPOR2Q86V24 386 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 NEIL2Q969S2 332 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 GTPBP3Q969Y2 492 aaKnown RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 ARRDC3Q96B67 414 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 FRG2BQ96QU4 278 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 PLA2G2FQ9BZM2 168 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 TRIM15Q9C019 465 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 DERL2Q9GZP9 239 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 CCDC177Q9NQR7 707 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-203ENST00000378037 GPRC5BQ9NZH0 403 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 NCKAP1Q9Y2A7 1128 aa7.87□□□□□ -1.15
CKAP2-203ENST00000378037 A0A1B0GTW7 788 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 SMIM30A4D0T7 59 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 EPOPA6NHQ4 379 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF487B1APH4 448 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CACNB4O00305 520 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 B4GAT1O43505 415 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CLPTM1O96005 669 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 SERPINA1P01009 418 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 C1QCP02747 245 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 PGRP06401 933 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 HTR7P34969 479 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 BUD31P41223 144 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 CSNK1DP48730 415 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 TRIM25Q14258 630 aaKnown RBP7.86□□□□□ -1.15
CKAP2-203ENST00000378037 Q6ZS52 159 aa7.86□□□□□ -1.15
CKAP2-203ENST00000378037 SHISA6Q6ZSJ9 500 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms