RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TESCQ96BS2 214 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 SLC22A12Q96S37 553 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 ACOT13Q9NPJ3 140 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 POLE4Q9NR33 117 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 NDRG4Q9ULP0 352 aaKnown RBP12.85□□□□□ -0.35
ACTN1-202ENST00000376839 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 PCDHB7Q9Y5E2 793 aa12.85□□□□□ -0.35
ACTN1-202ENST00000376839 ZBBXA8MT70 800 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 FAM20BO75063 409 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 LCKP06239 509 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TGM1P22735 817 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CCR7P32248 378 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 S100ZQ8WXG8 99 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TBC1D20Q96BZ9 403 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 REXO4Q9GZR2 422 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 FBXO8Q9NRD0 319 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PNMA8BQ9ULN7 279 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 VPS4AQ9UN37 437 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SAMHD1Q9Y3Z3 626 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CLIC1O00299 241 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 RGS10O43665 173 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 KCNK5O95279 499 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SEMG1P04279 462 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 FABP3P05413 133 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ENGP17813 658 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 FPR1P21462 350 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 DNAJA1P31689 397 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SPAM1P38567 509 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 B4GALNT1Q00973 533 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CDH18Q13634 790 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 MAPK11Q15759 364 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 VMACQ2NL98 169 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ATAD3AQ9NVI7 634 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 KCTD5Q9NXV2 234 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 NPIPB15A6NHN6 443 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TTC34A8MYJ7 566 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 EVPLLA8MZ36 301 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 WBP4O75554 376 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 AMD1P17707 334 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 KIR3DL1P43629 444 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ST13P50502 369 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ARHGDIAP52565 204 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CXCR4P61073 352 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CREMQ03060 361 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 TPGS1Q6ZTW0 290 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 UBE2R2Q712K3 238 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 AHSA2Q719I0 299 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SERPINA11Q86U17 422 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 HORMAD1Q86X24 394 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ATG16L2Q8NAA4 619 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SKA2Q8WVK7 121 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 OVCA2Q8WZ82 227 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 NELL1Q92832 810 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ITPKCQ96DU7 683 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 CMTM7Q96FZ5 175 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 APOL4Q9BPW4 351 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
ACTN1-202ENST00000376839 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 KRT84Q9NSB2 600 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SACM1LQ9NTJ5 587 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 SNX6Q9UNH7 406 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
ACTN1-202ENST00000376839 FPGTO14772 594 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 AQP9O43315 295 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 KDELR2P33947 212 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 TGFBR2P37173 567 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 GSSP48637 474 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
ACTN1-202ENST00000376839 SMAD3P84022 425 aaKnown RBP12.83□□□□□ -0.36
ACTN1-202ENST00000376839 ZXDBP98169 803 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 UGT8Q16880 541 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 SLC8B1Q6J4K2 584 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 NOXRED1Q6NXP6 359 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 VRK3Q8IV63 474 aa12.83□□□□□ -0.36
ACTN1-202ENST00000376839 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms