RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CDH12P55289 794 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 DMPKQ09013 629 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 SGCGQ13326 291 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ZNF761Q86XN6 746 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 CNTN4Q8IWV2 1026 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 GHDCQ8N2G8 530 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 HMGCLL1Q8TB92 370 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ZCCHC10Q8TBK6 192 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 PIH1D2Q8WWB5 315 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 RANBP9Q96S59 729 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 LRRC3Q9BY71 257 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 C6orf62Q9GZU0 229 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 ARNT2Q9HBZ2 717 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 WDR81Q562E7 1941 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ARID1AO14497 2285 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 FAM234BA2RU67 622 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 TARM1B6A8C7 271 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 H7BY64 318 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 DBTP11182 482 aaKnown RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 CLCNKAP51800 687 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 RAB8AP61006 207 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 SPIBQ01892 262 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ZNF33AQ06730 810 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 TMEM115Q12893 351 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 USP39Q53GS9 565 aaKnown RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDR1-227ENST00000376570 TPGS2Q68CL5 300 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ABRAXAS1Q6UWZ7 409 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 RRM2BQ7LG56 351 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 SPATA19Q7Z5L4 167 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 TOP1MTQ969P6 601 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 DACT3Q96B18 629 aaPredicted RBP11.35□□□□□ -0.59
DDR1-227ENST00000376570 PRAP1Q96NZ9 151 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 PKP4Q99569 1192 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 ZNF225Q9UK10 706 aa11.35□□□□□ -0.59
DDR1-227ENST00000376570 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CLIC1O00299 241 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 E2F3O00716 465 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 SOX14O95416 240 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CEBPBP17676 345 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 PPM1AP35813 382 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CCDC157Q569K6 752 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 FRG2Q64ET8 278 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 SULT1C3Q6IMI6 304 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 PRMT9Q6P2P2 845 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 PRR23CQ6ZRP0 262 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 WDR53Q7Z5U6 358 aaPredicted RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 THOC6Q86W42 341 aaKnown RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 PIK3C3Q8NEB9 887 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 FRG2BQ96QU4 278 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 UGT2B28Q9BY64 529 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 REEP1Q9H902 201 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 SPHK2Q9NRA0 654 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 OR1F1O43749 312 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 THRBP10828 461 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 LAMP1P11279 417 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 HOXB8P17481 243 aaPredicted RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 AGXTP21549 392 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 LBX1P52954 281 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 SMARCB1Q12824 385 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 GPNMBQ14956 572 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 PARGQ86W56 976 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 TRPV3Q8NET8 790 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CLP1Q92989 425 aaKnown RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 TOR3AQ9H497 397 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 IKZF5Q9H5V7 419 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 ZNF860A6NHJ4 632 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 SLC28A1O00337 649 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 ATG13O75143 517 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 VPS4BO75351 444 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 IL6P05231 212 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CDH2P19022 906 aaPredicted RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 PSMB5P28074 263 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 CDKN2CP42773 168 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 TBPL2Q6SJ96 375 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 UBE2FQ969M7 185 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 IL4I1Q96RQ9 567 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 MRM3Q9HC36 420 aaKnown RBP11.34□□□□□ -0.59
DDR1-227ENST00000376570 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 RIMS3Q9UJD0 308 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 ST14Q9Y5Y6 855 aa11.34□□□□□ -0.59
DDR1-227ENST00000376570 WASHC1A8K0Z3 465 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 DLGAP3O95886 979 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
DDR1-227ENST00000376570 MAGEA12P43365 314 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 SEPHS1P49903 392 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 DOC2AQ14183 400 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 CACNA1EQ15878 2313 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 KANK2Q63ZY3 851 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 WASH2PQ6VEQ5 465 aa11.33□□□□□ -0.6
DDR1-227ENST00000376570 ERMP1Q7Z2K6 904 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms