RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GBX2P52951 348 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 DAOAP59103 153 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 PRKCZQ05513 592 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ENPP2Q13822 863 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SLC2A7Q6PXP3 512 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ANKRD23Q86SG2 305 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 POMPQ9Y244 141 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GPIP06744 558 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ITGA5P08648 1049 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 SLC2A2P11168 524 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 HK1P19367 917 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 ARL2P36404 184 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CWF19L1Q69YN2 538 aaKnown RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 TXNDC8Q6A555 127 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 KCTD9Q7L273 389 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-201ENST00000375820 TREM1Q9NP99 234 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CLDND1Q9NY35 253 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 DTLQ9NZJ0 730 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 PEX16Q9Y5Y5 336 aa13.4□□□□□ -0.26
COL4A1-201ENST00000375820 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 HCRTO43612 131 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CCR8P51685 355 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CLCNKAP51800 687 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 IL10RBQ08334 325 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 OCLNQ16625 522 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 SSX6Q7RTT6 188 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 GPALPP1Q8IXQ4 340 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 OR4E2Q8NGC2 313 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 WDR26Q9H7D7 661 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 KAT8Q9H7Z6 458 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF282Q9UDV7 671 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 A8MV72 311 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PDCD5O14737 125 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ALPPL2P10696 532 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CKMT2P17540 419 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PTGER3P43115 390 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 WSCD2Q2TBF2 565 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 JPH3Q8WXH2 748 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF700Q9H0M5 742 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 TIMMDC1Q9NPL8 285 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 LYARQ9NX58 379 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 E2F3O00716 465 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 IL33O95760 270 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 L1CAMP32004 1257 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ASPAP45381 313 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 TSTQ16762 297 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 KLHL6Q8WZ60 621 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 SLC7A6OSQ96CW6 309 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ZNF395Q9H8N7 513 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 J3KR12 359 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 GSTT2BP0CG30 244 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PDGFRLQ15198 375 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CARD16Q5EG05 197 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 LYSMD3Q7Z3D4 306 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 OR5T2Q8NGG2 359 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CNDP2Q96KP4 475 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 GSKIPQ9P0R6 139 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 UTS2RQ9UKP6 389 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 RUVBL1Q9Y265 456 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 ECI2O75521 394 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 RLN2P04090 185 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 INHAP05111 366 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 RAP2AP10114 183 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 VAMP1P23763 118 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PITPNAQ00169 270 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 CHRNA6Q15825 494 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 UGT8Q16880 541 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 DBF4BQ8NFT6 615 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 OR2L2Q8NH16 312 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 TYRP1P17643 537 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 YBEYP58557 167 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 Q6ZVU0 165 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 LRRC70Q7Z2Q7 622 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 C1orf52Q8N6N3 182 aaKnown RBP13.39□□□□□ -0.27
COL4A1-201ENST00000375820 OR5K1Q8NHB7 308 aa13.39□□□□□ -0.27
COL4A1-201ENST00000375820 HNRNPABQ99729 332 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms